Literature DB >> 26779416

Eukaryote-specific extensions in ribosomal proteins of the small subunit: Structure and function.

Arnab Ghosh1, Anton A Komar1.   

Abstract

High-resolution structures of yeast ribosomes have improved our understanding of the architecture and organization of eukaryotic rRNA and proteins, as well as eukaryote-specific extensions present in some conserved ribosomal proteins. Despite this progress, assignment of specific functions to individual proteins and/or eukaryote-specific protein extensions remains challenging. It has been suggested that eukaryote-specific extensions of conserved proteins from the small ribosomal subunit may facilitate eukaryote-specific reactions in the initiation phase of protein synthesis. This review summarizes emerging data describing the structural and functional significance of eukaryote-specific extensions of conserved small ribosomal subunit proteins, particularly their possible roles in recruitment and spatial organization of eukaryote-specific initiation factors.

Entities:  

Keywords:  conserved ribosomal proteins; eukaryote-specific extensions; eukaryotic translation initiation factors; eukaryotic/yeast ribosome; protein synthesis; small ribosomal subunit

Year:  2015        PMID: 26779416      PMCID: PMC4682806          DOI: 10.1080/21690731.2014.999576

Source DB:  PubMed          Journal:  Translation (Austin)        ISSN: 2169-0731


  77 in total

1.  Multiple roles for the C-terminal domain of eIF5 in translation initiation complex assembly and GTPase activation.

Authors:  K Asano; A Shalev; L Phan; K Nielsen; J Clayton; L Valásek; T F Donahue; A G Hinnebusch
Journal:  EMBO J       Date:  2001-05-01       Impact factor: 11.598

Review 2.  eIF3: a versatile scaffold for translation initiation complexes.

Authors:  Alan G Hinnebusch
Journal:  Trends Biochem Sci       Date:  2006-08-22       Impact factor: 13.807

3.  Structural roles for human translation factor eIF3 in initiation of protein synthesis.

Authors:  Bunpote Siridechadilok; Christopher S Fraser; Richard J Hall; Jennifer A Doudna; Eva Nogales
Journal:  Science       Date:  2005-12-02       Impact factor: 47.728

4.  Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection.

Authors:  Leos Valásek; Klaus H Nielsen; Fan Zhang; Christie A Fekete; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

5.  The 67-kDa laminin receptor originated from a ribosomal protein that acquired a dual function during evolution.

Authors:  E Ardini; G Pesole; E Tagliabue; A Magnifico; V Castronovo; M E Sobel; M I Colnaghi; S Ménard
Journal:  Mol Biol Evol       Date:  1998-08       Impact factor: 16.240

6.  Prognostic significance of the 67-kilodalton laminin receptor expression in human breast carcinomas.

Authors:  S Martignone; S Ménard; R Bufalino; N Cascinelli; R Pellegrini; E Tagliabue; S Andreola; F Rilke; M I Colnaghi
Journal:  J Natl Cancer Inst       Date:  1993-03-03       Impact factor: 13.506

Review 7.  The scanning mechanism of eukaryotic translation initiation.

Authors:  Alan G Hinnebusch
Journal:  Annu Rev Biochem       Date:  2014-01-29       Impact factor: 23.643

8.  The indispensable N-terminal half of eIF3j/HCR1 cooperates with its structurally conserved binding partner eIF3b/PRT1-RRM and with eIF1A in stringent AUG selection.

Authors:  Latifa Elantak; Susan Wagner; Anna Herrmannová; Martina Karásková; Edit Rutkai; Peter J Lukavsky; Leos Valásek
Journal:  J Mol Biol       Date:  2010-01-11       Impact factor: 5.469

9.  Small ribosomal protein RPS0 stimulates translation initiation by mediating 40S-binding of eIF3 via its direct contact with the eIF3a/TIF32 subunit.

Authors:  Tomáš Kouba; István Dányi; Stanislava Gunišová; Vanda Munzarová; Vladislava Vlčková; Lucie Cuchalová; Andreas Neueder; Philipp Milkereit; Leoš Shivaya Valášek
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

10.  Rps5-Rps16 communication is essential for efficient translation initiation in yeast S. cerevisiae.

Authors:  Arnab Ghosh; Supriya Jindal; Amber A Bentley; Alan G Hinnebusch; Anton A Komar
Journal:  Nucleic Acids Res       Date:  2014-06-19       Impact factor: 16.971

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  1 in total

1.  Communication between RACK1/Asc1 and uS3 (Rps3) is essential for RACK1/Asc1 function in yeast Saccharomyces cerevisiae.

Authors:  Nishant Singh; Supriya Jindal; Arnab Ghosh; Anton A Komar
Journal:  Gene       Date:  2019-05-01       Impact factor: 3.688

  1 in total

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