Literature DB >> 26774180

Organoid Models of Human Gastrointestinal Development and Disease.

Priya H Dedhia1, Nina Bertaux-Skeirik2, Yana Zavros3, Jason R Spence4.   

Abstract

We have greatly advanced our ability to grow a diverse range of tissue-derived and pluripotent stem cell-derived gastrointestinal (GI) tissues in vitro. These systems, broadly referred to as organoids, have allowed the field to move away from the often nonphysiological, transformed cell lines that have been used for decades in GI research. Organoids are derived from primary tissues and have the capacity for long-term growth. They contain varying levels of cellular complexity and physiological similarity to native organ systems. We review the latest discoveries from studies of tissue-derived and pluripotent stem cell-derived intestinal, gastric, esophageal, liver, and pancreatic organoids. These studies have provided important insights into GI development, tissue homeostasis, and disease and might be used to develop personalized medicines.
Copyright © 2016 AGA Institute. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gastrointestinal Development; Gastrointestinal Disease; Gastrointestinal Regeneration; Gut Organoids

Mesh:

Year:  2016        PMID: 26774180      PMCID: PMC4842135          DOI: 10.1053/j.gastro.2015.12.042

Source DB:  PubMed          Journal:  Gastroenterology        ISSN: 0016-5085            Impact factor:   33.883


  166 in total

1.  Long-term follow-up of tissue-engineered intestine after anastomosis to native small bowel.

Authors:  S Kaihara; S S Kim; B S Kim; D Mooney; K Tanaka; J P Vacanti
Journal:  Transplantation       Date:  2000-05-15       Impact factor: 4.939

2.  Functional engraftment of colon epithelium expanded in vitro from a single adult Lgr5⁺ stem cell.

Authors:  Shiro Yui; Tetsuya Nakamura; Toshiro Sato; Yasuhiro Nemoto; Tomohiro Mizutani; Xiu Zheng; Shizuko Ichinose; Takashi Nagaishi; Ryuichi Okamoto; Kiichiro Tsuchiya; Hans Clevers; Mamoru Watanabe
Journal:  Nat Med       Date:  2012-03-11       Impact factor: 53.440

3.  Distinct populations of endoderm cells converge to generate the embryonic liver bud and ventral foregut tissues.

Authors:  Kimberly D Tremblay; Kenneth S Zaret
Journal:  Dev Biol       Date:  2005-04-01       Impact factor: 3.582

4.  Retinoic acid regulates morphogenesis and patterning of posterior foregut derivatives.

Authors:  Zengxin Wang; Pascal Dollé; Wellington V Cardoso; Karen Niederreither
Journal:  Dev Biol       Date:  2006-05-23       Impact factor: 3.582

5.  Sfrp5 coordinates foregut specification and morphogenesis by antagonizing both canonical and noncanonical Wnt11 signaling.

Authors:  Yan Li; Scott A Rankin; Débora Sinner; Alan P Kenny; Paul A Krieg; Aaron M Zorn
Journal:  Genes Dev       Date:  2008-11-01       Impact factor: 11.361

6.  Paneth cell differentiation in the developing intestine of normal and transgenic mice.

Authors:  L Bry; P Falk; K Huttner; A Ouellette; T Midtvedt; J I Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

7.  MYO5B mutations cause microvillus inclusion disease and disrupt epithelial cell polarity.

Authors:  Thomas Müller; Michael W Hess; Natalia Schiefermeier; Kristian Pfaller; Hannes L Ebner; Peter Heinz-Erian; Hannes Ponstingl; Joachim Partsch; Barbara Röllinghoff; Henrik Köhler; Thomas Berger; Henning Lenhartz; Barbara Schlenck; Roderick J Houwen; Christopher J Taylor; Heinz Zoller; Silvia Lechner; Olivier Goulet; Gerd Utermann; Frank M Ruemmele; Lukas A Huber; Andreas R Janecke
Journal:  Nat Genet       Date:  2008-08-24       Impact factor: 38.330

8.  The Basic Helix-Loop-Helix Transcription Factor NEUROG3 Is Required for Development of the Human Endocrine Pancreas.

Authors:  Patrick S McGrath; Carey L Watson; Cameron Ingram; Michael A Helmrath; James M Wells
Journal:  Diabetes       Date:  2015-02-03       Impact factor: 9.461

9.  Modelling human development and disease in pluripotent stem-cell-derived gastric organoids.

Authors:  Kyle W McCracken; Emily M Catá; Calyn M Crawford; Katie L Sinagoga; Michael Schumacher; Briana E Rockich; Yu-Hwai Tsai; Christopher N Mayhew; Jason R Spence; Yana Zavros; James M Wells
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

10.  Metastatic tumor evolution and organoid modeling implicate TGFBR2 as a cancer driver in diffuse gastric cancer.

Authors:  Lincoln D Nadauld; Sarah Garcia; Georges Natsoulis; John M Bell; Laura Miotke; Erik S Hopmans; Hua Xu; Reetesh K Pai; Curt Palm; John F Regan; Hao Chen; Patrick Flaherty; Akifumi Ootani; Nancy R Zhang; James M Ford; Calvin J Kuo; Hanlee P Ji
Journal:  Genome Biol       Date:  2014-08-27       Impact factor: 17.906

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  96 in total

Review 1.  Physiologically relevant human tissue models for infectious diseases.

Authors:  Melody Mills; Mary K Estes
Journal:  Drug Discov Today       Date:  2016-06-25       Impact factor: 7.851

Review 2.  Intestinal organoids in infants and children.

Authors:  Sinobol Chusilp; Bo Li; Dorothy Lee; Carol Lee; Paisarn Vejchapipat; Agostino Pierro
Journal:  Pediatr Surg Int       Date:  2019-09-25       Impact factor: 1.827

3.  Long-term flow through human intestinal organoids with the gut organoid flow chip (GOFlowChip).

Authors:  Barkan Sidar; Brittany R Jenkins; Sha Huang; Jason R Spence; Seth T Walk; James N Wilking
Journal:  Lab Chip       Date:  2019-10-09       Impact factor: 6.799

4.  A xenogeneic-free system generating functional human gut organoids from pluripotent stem cells.

Authors:  Hajime Uchida; Masakazu Machida; Takumi Miura; Tomoyuki Kawasaki; Takuya Okazaki; Kengo Sasaki; Seisuke Sakamoto; Noriaki Ohuchi; Mureo Kasahara; Akihiro Umezawa; Hidenori Akutsu
Journal:  JCI Insight       Date:  2017-01-12

Review 5.  Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age.

Authors:  Jennifer Barrila; Aurélie Crabbé; Jiseon Yang; Karla Franco; Seth D Nydam; Rebecca J Forsyth; Richard R Davis; Sandhya Gangaraju; C Mark Ott; Carolyn B Coyne; Mina J Bissell; Cheryl A Nickerson
Journal:  Infect Immun       Date:  2018-10-25       Impact factor: 3.441

Review 6.  Insights into the role of the intestinal microbiota in colon cancer.

Authors:  Sofia Oke; Alberto Martin
Journal:  Therap Adv Gastroenterol       Date:  2017-02-01       Impact factor: 4.409

7.  Live imaging analysis of human gastric epithelial spheroids reveals spontaneous rupture, rotation and fusion events.

Authors:  T Andrew Sebrell; Barkan Sidar; Rachel Bruns; Royce A Wilkinson; Blake Wiedenheft; Paul J Taylor; Brian A Perrino; Linda C Samuelson; James N Wilking; Diane Bimczok
Journal:  Cell Tissue Res       Date:  2017-11-25       Impact factor: 5.249

8.  Human Gastrointestinal Organoid Models for Studying Microbial Disease and Cancer.

Authors:  Jayati Chakrabarti; Martha B Dua-Awereh; Loryn Holokai; Yana Zavros
Journal:  Curr Top Microbiol Immunol       Date:  2021       Impact factor: 4.291

Review 9.  Regenerative medicine for the esophagus.

Authors:  Kengo Kanetaka; Shinichiro Kobayashi; Susumu Eguchi
Journal:  Surg Today       Date:  2017-12-06       Impact factor: 2.549

10.  Guided self-organization and cortical plate formation in human brain organoids.

Authors:  Madeline A Lancaster; Nina S Corsini; Simone Wolfinger; E Hilary Gustafson; Alex W Phillips; Thomas R Burkard; Tomoki Otani; Frederick J Livesey; Juergen A Knoblich
Journal:  Nat Biotechnol       Date:  2017-05-31       Impact factor: 54.908

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