| Literature DB >> 26766914 |
Jingwei Liu1, Caiyun He1, Quan Yuan1, Zhenning Wang1, Chengzhong Xing1, Yuan Yuan1.
Abstract
BACKGROUND: Results of the association between polymorphisms of osteopontin (OPN) gene promoter region and risk of cancer were inconclusive. The aim of this meta-analysis was to elucidate whether OPN promoter polymorphisms were associated with cancer risk.Entities:
Keywords: OPN; cancer; polymorphism; promoter
Year: 2015 PMID: 26766914 PMCID: PMC4699542 DOI: 10.2147/OTT.S94606
Source DB: PubMed Journal: Onco Targets Ther ISSN: 1178-6930 Impact factor: 4.147
Figure 1The flowchart of literature inclusion and exclusion.
Abbreviation: OPN, osteopontin.
Characteristics of the included studies in this meta-analysis
| Author | Year | Ethnicity | Cancer type | Controls source | Case
| Control
| Genotyping method | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | MM | WM | WW | Total | MM | WM | WW | ||||||
| Mu et al | 2013 | Chinese | Thyroid cancer | PB | 363 | 72 | 187 | 104 | 413 | 94 | 219 | 100 | Taqman |
| Lee et al | 2013 | Chinese | Gastric cancer | HB | 146 | 26 | 72 | 48 | 128 | 18 | 64 | 46 | Sequencing |
| Chen et al | 2013 | Chinese | Lung cancer | PB | 360 | 73 | 150 | 137 | 360 | 69 | 136 | 155 | Sequencing |
| Zhao et al | 2012 | Chinese | Gastric cancer | PB | 200 | 41 | 92 | 67 | 200 | 36 | 78 | 86 | Sequencing |
| Xu et al | 2011 | Chinese | Cervical cancer | PB | 300 | 83 | 129 | 88 | 774 | 128 | 359 | 287 | Taqman |
| Chiu et al | 2010 | Chinese | Oral cancer | NA | 97 | 18 | 52 | 27 | 100 | 9 | 49 | 42 | Sequencing |
| Chen et al | 2010 | Chinese | Glioma | HB | 664 | 99 | 345 | 220 | 669 | 90 | 306 | 273 | PCR-LDR |
| Zhu | 2013 | Chinese | Gastric cancer | HB | 106 | 16 | 46 | 44 | 106 | 12 | 41 | 53 | Sequencing |
| Mu et al | 2013 | Chinese | Thyroid cancer | PB | 363 | 119 | 171 | 73 | 413 | 62 | 187 | 164 | Taqman |
| Lee et al | 2013 | Chinese | Gastric cancer | HB | 146 | 21 | 66 | 59 | 128 | 8 | 55 | 65 | Sequencing |
| Chen et al | 2013 | Chinese | Lung cancer | PB | 360 | 31 | 165 | 164 | 360 | 44 | 163 | 153 | Sequencing |
| Zhao et al | 2012 | Chinese | Gastric cancer | PB | 200 | 15 | 94 | 91 | 200 | 22 | 93 | 85 | Sequencing |
| Xu et al | 2011 | Chinese | Cervical cancer | PB | 300 | 24 | 49 | 227 | 774 | 106 | 334 | 334 | Taqman |
| Chiu et al | 2010 | Chinese | Oral cancer | NA | 97 | 9 | 41 | 47 | 100 | 17 | 50 | 33 | Sequencing |
| Chen et al | 2010 | Chinese | Glioma | HB | 667 | 69 | 299 | 299 | 672 | 77 | 311 | 284 | PCR-LDR |
| Shin et al | 2007 | Korean | Liver cancer | HB | NA | NA | NA | NA | NA | NA | NA | NA | Taqman |
Note:
Study with only allele information.
Abbreviations: PB, population-based; HB, hospital-based; W, wild-type allele; M, mutant-type allele; NA, not applicable; PCR-LDR, polymerase chain reaction/ligase detection reaction.
Meta-analysis results of the association between OPN rs17524488 (-156-/G) polymorphism and cancer risk
| Genetic model | Group/subgroup | Studies (n) | Heterogeneity test
| Statistical model | Test for overall effect
| ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) | |||||||
| GG vs (-/-) | Overall | 7 | 65.90 | 0.007 | R | ||
| PB | 4 | 79.30 | 0.002 | R | 1.29 (0.81–2.05) | 0.290 | |
| HB | 2 | 0.00 | 0.973 | F | |||
| Sequencing | 4 | 12.10 | 0.332 | F | |||
| Taqman | 2 | 92.90 | <0.001 | R | 1.25 (0.45–3.52) | 0.668 | |
| (-/G) vs (-/-) | Overall | 7 | 31.40 | 0.188 | F | ||
| PB | 4 | 46.10 | 0.135 | F | 1.13 (0.95–1.34) | 0.163 | |
| HB | 2 | 0.00 | 0.376 | F | |||
| Sequencing | 4 | 0.00 | 0.670 | F | |||
| Taqman | 2 | 56.60 | 0.129 | F | 0.99 (0.79–1.25) | 0.964 | |
| G allele vs (-) allele | Overall | 7 | 66.00 | 0.007 | R | ||
| PB | 4 | 79.80 | 0.002 | R | 1.16 (0.91–1.48) | 0.222 | |
| HB | 2 | 0.00 | 0.787 | F | |||
| Sequencing | 4 | 0.00 | 0.432 | F | |||
| Taqman | 2 | 93.00 | <0.001 | R | 1.13 (0.67–1.90) | 0.655 | |
Note: Significant results are marked in bold.
Abbreviations: OPN, osteopontin; R, random-effect model; F, fixed-effect model; PB, population-based; HB, hospital-based; OR, odds ratio; CI, confidence interval; Phet, P-value for heterogeneity test.
Figure 2Forest plots for the association between OPN rs17524488 (-156-/G) polymorphism and cancer risk.
Notes: (A) Forest plot for the association between OPN rs17524488 (-156-/G) polymorphism and cancer risk (GG vs -/-); (B) Forest plot for the association between OPN rs17524488 (-156-/G) polymorphism and cancer risk (-G vs -/-). Weights are from random-effects analysis.
Abbreviations: OPN, osteopontin; OR, odds ratio; CI, confidence interval.
Figure 3Forest plots for the association between OPN rs11730582 (-443C/T) polymorphism and cancer risk.
Notes: (A) Forest plot for the association between OPN rs11730582 (-443C/T) polymorphism and cancer risk (CC vs TT); (B) Forest plot for the association between OPN rs11730582 (-443C/T) polymorphism and cancer risk (CT vs TT). Weights are from random-effects analysis.
Abbreviations: OPN, osteopontin; OR, odds ratio; CI, confidence interval.
Meta-analysis results of the association between OPN rs11730582 (-443C/T) polymorphism and cancer risk
| Genetic model | Group/subgroup | N | Heterogeneity test
| Statistical model | Test for overall effect
| ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) | |||||||
| CC vs TT | Overall | 8 | 91.70 | <0.001 | R | 0.98 (0.49–1.97) | 0.964 |
| PB | 4 | 95.90 | <0.001 | R | 0.89 (0.25–3.11) | 0.852 | |
| HB | 3 | 72.30 | 0.027 | R | 1.45 (0.68–3.09) | 0.333 | |
| Sequencing | 5 | 71.70 | 0.007 | R | 0.92 (0.49–1.73) | 0.787 | |
| Taqman | 2 | 98.40 | <0.001 | R | 1.20 (0.10–14.78) | 0.886 | |
| CT vs TT | Overall | 8 | 92.60 | <0.001 | R | 0.88 (0.54–1.43) | 0.610 |
| PB | 4 | 96.50 | <0.001 | R | 0.79 (0.31–2.02) | 0.627 | |
| HB | 3 | 29.20 | 0.243 | F | 1.01 (0.83–1.23) | 0.925 | |
| Sequencing | 5 | 28.30 | 0.233 | F | 0.98 (0.81–1.20) | 0.863 | |
| Taqman | 2 | 98.80 | <0.001 | R | 0.67 (0.07–6.06) | 0.718 | |
| C allele vs T allele | Overall | 9 | 94.40 | <0.001 | R | 0.92 (0.64–1.33) | 0.665 |
| PB | 4 | 96.70 | <0.001 | R | 0.87 (0.40–1.87) | 0.715 | |
| HB | 4 | 72.80 | 0.012 | R | 1.06 (0.80–1.39) | 0.683 | |
| Sequencing | 5 | 73.20 | 0.005 | R | 0.97 (0.73–1.29) | 0.860 | |
| Taqman | 3 | 98.40 | <0.001 | R | 0.84 (0.28–2.54) | 0.756 | |
Abbreviations: OPN, osteopontin; R, random-effect model; F, fixed-effect model; PB, population-based; HB, hospital-based; OR, odds ratio; CI, confidence interval; Phet, P-value for heterogeneity test.
Results of publication bias test
| Polymorphism | Compared genotype | Begg’s test
| Egger’s test
| ||
|---|---|---|---|---|---|
| GG vs (-/-) | 0.45 | 0.652 | 0.53 | 0.620 | |
| (-/G) vs (-/-) | −0.45 | 0.652 | 0.02 | 0.986 | |
| G allele vs (-) allele | 0.45 | 0.652 | 0.47 | 0.656 | |
| CC vs TT | 0.00 | 1.000 | −0.23 | 0.823 | |
| CT vs TT | 0.00 | 1.000 | 0.10 | 0.924 | |
| C allele vs T allele | −0.42 | 0.677 | −0.22 | 0.829 | |
Abbreviation: OPN, osteopontin.
Information of studies concerning the relation of OPN promoter polymorphism rs28357094 (-66G/T) and risk of cancer
| Author | Year | Ethnicity | Cancer type | Controls source | Case
| Control
| Genotyping method | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | GT | TT | GG | GT | TT | ||||||
| Mu et al | 2013 | Chinese | Thyroid cancer | PB | 97 | 167 | 99 | 108 | 191 | 114 | Taqman |
| Lee et al | 2013 | Chinese | Gastric cancer | HB | 0 | 0 | 146 | 0 | 0 | 128 | Sequencing |
| Chen et al | 2013 | Chinese | Lung cancer | PB | 0 | 4 | 356 | 0 | 9 | 351 | Sequencing |
| Zhao et al | 2012 | Chinese | Gastric cancer | PB | 0 | 0 | 200 | 0 | 0 | 200 | Sequencing |
| Xu et al | 2011 | Chinese | Cervical cancer | PB | 113 | 90 | 97 | 235 | 358 | 181 | Taqman |
| Chiu et al | 2010 | Chinese | Oral cancer | NA | 0 | 0 | 97 | 0 | 0 | 100 | Sequencing |
| Chen et al | 2010 | Chinese | Glioma | HB | 0 | 0 | 670 | 0 | 0 | 680 | PCR-LDR |
Abbreviations: OPN, osteopontin; PB, population-based; HB, hospital-based; NA, not applicable; PCR-LDR, polymerase chain reaction/ligase detection reaction.