Literature DB >> 26765967

Molecular characterization of Botrytis ourmia-like virus, a mycovirus close to the plant pathogenic genus Ourmiavirus.

Livia Donaire1, Julio Rozas2, María A Ayllón3.   

Abstract

The molecular characterization of a novel single-stranded RNA virus, obtained by next generation sequencing using Illumina platform, in a field grapevine isolate of the plant pathogenic fungus Botrytis, is reported in this work. The sequence comparison of this virus against the NCBI database showed a strong identity with RNA dependent RNA polymerases (RdRps) of plant pathogenic viruses belonging to the genus Ourmiavirus, therefore, this novel virus was named Botrytis ourmia-like virus (BOLV). BOLV has one open reading frame of 2169 nucleotides, which encodes a protein of 722 amino acids showing conserved domains of plant RNA viruses RdRps such as the most conserved GDD active domain. Our analyses showed that BOLV is phylogenetically closer to the fungal Narnavirus and the plant Ourmiavirus than to Mitovirus of the family Narnaviridae. Hence, we proposed that BOLV might represent the link between fungal viruses of the family Narnaviridae and the plant ourmiaviruses.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Botrytis; Evolution; Mycovirus; Narnaviridae; Ourmiavirus

Mesh:

Substances:

Year:  2016        PMID: 26765967     DOI: 10.1016/j.virol.2015.11.027

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  22 in total

1.  Deep sequencing of mycovirus-derived small RNAs from Botrytis species.

Authors:  Livia Donaire; María A Ayllón
Journal:  Mol Plant Pathol       Date:  2016-10-12       Impact factor: 5.663

Review 2.  Global Organization and Proposed Megataxonomy of the Virus World.

Authors:  Eugene V Koonin; Valerian V Dolja; Mart Krupovic; Arvind Varsani; Yuri I Wolf; Natalya Yutin; F Murilo Zerbini; Jens H Kuhn
Journal:  Microbiol Mol Biol Rev       Date:  2020-03-04       Impact factor: 11.056

3.  Multiple virus infection in a single strain of Fusarium poae shown by deep sequencing.

Authors:  Hideki Osaki; Atsuko Sasaki; Koji Nomiyama; Keisuke Tomioka
Journal:  Virus Genes       Date:  2016-08-22       Impact factor: 2.332

4.  Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomes.

Authors:  Kerrigan B Gilbert; Emily E Holcomb; Robyn L Allscheid; James C Carrington
Journal:  PLoS One       Date:  2019-07-24       Impact factor: 3.240

5.  Resolving deep evolutionary relationships within the RNA virus phylum Lenarviricota.

Authors:  Sabrina Sadiq; Yan-Mei Chen; Yong-Zhen Zhang; Edward C Holmes
Journal:  Virus Evol       Date:  2022-06-14

6.  Novel Mycoviruses Discovered in the Mycovirome of a Necrotrophic Fungus.

Authors:  Ana Ruiz-Padilla; Julio Rodríguez-Romero; Irene Gómez-Cid; Davide Pacifico; María A Ayllón
Journal:  mBio       Date:  2021-05-11       Impact factor: 7.867

7.  Mycoviruses of an endophytic fungus can replicate in plant cells: evolutionary implications.

Authors:  L Nerva; G C Varese; B W Falk; M Turina
Journal:  Sci Rep       Date:  2017-05-15       Impact factor: 4.379

8.  A fungal Argonaute interferes with RNA interference.

Authors:  Quyet Nguyen; Akihide Iritani; Shuhei Ohkita; Ba V Vu; Kana Yokoya; Ai Matsubara; Ken-Ichi Ikeda; Nobuhiro Suzuki; Hitoshi Nakayashiki
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

9.  Virome Characterization of a Collection of S. sclerotiorum from Australia.

Authors:  Fan Mu; Jiatao Xie; Shufen Cheng; Ming Pei You; Martin J Barbetti; Jichun Jia; Qianqian Wang; Jiasen Cheng; Yanping Fu; Tao Chen; Daohong Jiang
Journal:  Front Microbiol       Date:  2018-01-11       Impact factor: 5.640

10.  Two Novel Hypovirulence-Associated Mycoviruses in the Phytopathogenic Fungus Botrytis cinerea: Molecular Characterization and Suppression of Infection Cushion Formation.

Authors:  Fangmin Hao; Ting Ding; Mingde Wu; Jing Zhang; Long Yang; Weidong Chen; Guoqing Li
Journal:  Viruses       Date:  2018-05-13       Impact factor: 5.048

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