Literature DB >> 26763878

De novo missense mutations in NALCN cause developmental and intellectual impairment with hypotonia.

Ryoko Fukai1,2, Hirotomo Saitsu1, Nobuhiko Okamoto3, Yasunari Sakai4, Aviva Fattal-Valevski5, Shiina Masaaki6, Yukihiro Kitai7, Michiko Torio4, Kanako Kojima-Ishii4, Kenji Ihara4,8, Veronika Chernuha5, Mitsuko Nakashima1, Satoko Miyatake1, Fumiaki Tanaka2, Noriko Miyake1, Naomichi Matsumoto1.   

Abstract

Three recessive mutations in the sodium leak channel, nonselective (NALCN) have been reported to cause intellectual disability and hypotonia. In addition, 14 de novo heterozygous mutations have been identified in 15 patients with arthrogryposis and neurodevelopmental impairment. Here, we report three patients with neurodevelopmental disease and hypotonia, harboring one recurrent (p.R1181Q) and two novel mutations (p.L312V and p.V1020F) occurring de novo in NALCN. Mutation p.L312 is located in the pore forming S6 region of domain I and p.V1020F in the S5 region of domain III. Mutation p.R1181Q is in a linker region. Mapping these three mutations to a model of NALCN showed p.Leu312 and p.Val1020 positioned in the hydrophobic core of the pore modules, indicating these two mutations may affect the gating function of NALCN. Although p.R1181Q is unlikely to affect the ion channel structure, previous studies have shown that an analogous mutation in Caenorhabditis elegans produced a phenotype with a coiling locomotion, suggesting that p.R1181Q could also affect NALCN function. Our three patients showed profound intellectual disability and growth delay, facial dysmorphologies and hypotonia. The present data support previous work suggesting heterozygous NALCN mutations lead to syndromic neurodevelopmental impairment.

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Year:  2016        PMID: 26763878     DOI: 10.1038/jhg.2015.163

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  19 in total

1.  MutationTaster evaluates disease-causing potential of sequence alterations.

Authors:  Jana Marie Schwarz; Christian Rödelsperger; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2010-08       Impact factor: 28.547

2.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

3.  A uniquely adaptable pore is consistent with NALCN being an ion sensor.

Authors:  Adriano Senatore; J David Spafford
Journal:  Channels (Austin)       Date:  2013-02-26       Impact factor: 2.581

4.  A Gain-of-Function Mutation in NALCN in a Child with Intellectual Disability, Ataxia, and Arthrogryposis.

Authors:  Kyota Aoyagi; Elsa Rossignol; Fadi F Hamdan; Ben Mulcahy; Lin Xie; Shinya Nagamatsu; Guy A Rouleau; Mei Zhen; Jacques L Michaud
Journal:  Hum Mutat       Date:  2015-06-22       Impact factor: 4.878

Review 5.  Sodium leak channels in neuronal excitability and rhythmic behaviors.

Authors:  Dejian Ren
Journal:  Neuron       Date:  2011-12-22       Impact factor: 17.173

6.  Mutations in NALCN cause an autosomal-recessive syndrome with severe hypotonia, speech impairment, and cognitive delay.

Authors:  Moeenaldeen D Al-Sayed; Hamad Al-Zaidan; Albandary Albakheet; Hana Hakami; Rosan Kenana; Yusra Al-Yafee; Mazhor Al-Dosary; Alya Qari; Tarfa Al-Sheddi; Muhammed Al-Muheiza; Wafa Al-Qubbaj; Yamina Lakmache; Hindi Al-Hindi; Muhammad Ghaziuddin; Dilek Colak; Namik Kaya
Journal:  Am J Hum Genet       Date:  2013-09-26       Impact factor: 11.025

7.  A case of autism spectrum disorder arising from a de novo missense mutation in POGZ.

Authors:  Ryoko Fukai; Yoko Hiraki; Hiroko Yofune; Yoshinori Tsurusaki; Mitsuko Nakashima; Hirotomo Saitsu; Fumiaki Tanaka; Noriko Miyake; Naomichi Matsumoto
Journal:  J Hum Genet       Date:  2015-02-19       Impact factor: 3.755

8.  The crystal structure of a voltage-gated sodium channel.

Authors:  Jian Payandeh; Todd Scheuer; Ning Zheng; William A Catterall
Journal:  Nature       Date:  2011-07-10       Impact factor: 49.962

Review 9.  Selectivity filters and cysteine-rich extracellular loops in voltage-gated sodium, calcium, and NALCN channels.

Authors:  Robert F Stephens; W Guan; Boris S Zhorov; J David Spafford
Journal:  Front Physiol       Date:  2015-05-19       Impact factor: 4.566

10.  Genomewide association study in cervical dystonia demonstrates possible association with sodium leak channel.

Authors:  Kin Y Mok; Susanne A Schneider; Daniah Trabzuni; Maria Stamelou; Mark Edwards; Dalia Kasperaviciute; Stuart Pickering-Brown; Monty Silverdale; John Hardy; Kailash P Bhatia
Journal:  Mov Disord       Date:  2013-11-13       Impact factor: 10.338

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  14 in total

1.  The NCA-1 and NCA-2 Ion Channels Function Downstream of Gq and Rho To Regulate Locomotion in Caenorhabditis elegans.

Authors:  Irini Topalidou; Pin-An Chen; Kirsten Cooper; Shigeki Watanabe; Erik M Jorgensen; Michael Ailion
Journal:  Genetics       Date:  2017-03-21       Impact factor: 4.562

2.  Novel NALCN variant: altered respiratory and circadian rhythm, anesthetic sensitivity.

Authors:  Bernarda Lozic; Stefan Johansson; Sanja Lovric Kojundzic; Josko Markic; Per Morten Knappskog; Angelika F Hahn; Helge Boman
Journal:  Ann Clin Transl Neurol       Date:  2016-10-11       Impact factor: 4.511

3.  The leak channel NALCN controls tonic firing and glycolytic sensitivity of substantia nigra pars reticulata neurons.

Authors:  Andrew Lutas; Carolina Lahmann; Magali Soumillon; Gary Yellen
Journal:  Elife       Date:  2016-05-13       Impact factor: 8.140

4.  Long-read assembly of the Chinese rhesus macaque genome and identification of ape-specific structural variants.

Authors:  Yaoxi He; Xin Luo; Bin Zhou; Ting Hu; Xiaoyu Meng; Peter A Audano; Zev N Kronenberg; Evan E Eichler; Jie Jin; Yongbo Guo; Yanan Yang; Xuebin Qi; Bing Su
Journal:  Nat Commun       Date:  2019-09-17       Impact factor: 14.919

5.  The NALCN Channel Regulator UNC-80 Functions in a Subset of Interneurons To Regulate Caenorhabditis elegans Reversal Behavior.

Authors:  Chuanman Zhou; Jintao Luo; Xiaohui He; Qian Zhou; Yunxia He; Xiaoqin Wang; Long Ma
Journal:  G3 (Bethesda)       Date:  2020-01-07       Impact factor: 3.154

6.  Methylation determines the extracellular calcium sensitivity of the leak channel NALCN in hippocampal dentate granule cells.

Authors:  Seul-Yi Lee; Tuan Anh Vuong; Xianlan Wen; Hyeon-Ju Jeong; Hyun-Kyung So; Ilmin Kwon; Jong-Sun Kang; Hana Cho
Journal:  Exp Mol Med       Date:  2019-10-10       Impact factor: 8.718

7.  Integrative analysis of genomic variants reveals new associations of candidate haploinsufficient genes with congenital heart disease.

Authors:  Enrique Audain; Anna Wilsdon; Jeroen Breckpot; Jose M G Izarzugaza; Tomas W Fitzgerald; Anne-Karin Kahlert; Alejandro Sifrim; Florian Wünnemann; Yasset Perez-Riverol; Hashim Abdul-Khaliq; Mads Bak; Anne S Bassett; D Woodrow Benson; Felix Berger; Ingo Daehnert; Koenraad Devriendt; Sven Dittrich; Piers Ef Daubeney; Vidu Garg; Karl Hackmann; Kirstin Hoff; Philipp Hofmann; Gregor Dombrowsky; Thomas Pickardt; Ulrike Bauer; Bernard D Keavney; Sabine Klaassen; Hans-Heiner Kramer; Christian R Marshall; Dianna M Milewicz; Scott Lemaire; Joseph S Coselli; Michael E Mitchell; Aoy Tomita-Mitchell; Siddharth K Prakash; Karl Stamm; Alexandre F R Stewart; Candice K Silversides; Reiner Siebert; Brigitte Stiller; Jill A Rosenfeld; Inga Vater; Alex V Postma; Almuth Caliebe; J David Brook; Gregor Andelfinger; Matthew E Hurles; Bernard Thienpont; Lars Allan Larsen; Marc-Phillip Hitz
Journal:  PLoS Genet       Date:  2021-07-29       Impact factor: 6.020

8.  NALCN channelopathies: Distinguishing gain-of-function and loss-of-function mutations.

Authors:  Eric G Bend; Yue Si; David A Stevenson; Pinar Bayrak-Toydemir; Tara M Newcomb; Erik M Jorgensen; Kathryn J Swoboda
Journal:  Neurology       Date:  2016-08-24       Impact factor: 9.910

9.  Dopamine negatively modulates the NCA ion channels in C. elegans.

Authors:  Irini Topalidou; Kirsten Cooper; Laura Pereira; Michael Ailion
Journal:  PLoS Genet       Date:  2017-10-02       Impact factor: 5.917

10.  Structure of the human sodium leak channel NALCN in complex with FAM155A.

Authors:  Jiongfang Xie; Meng Ke; Lizhen Xu; Shiyi Lin; Jin Huang; Jiabei Zhang; Fan Yang; Jianping Wu; Zhen Yan
Journal:  Nat Commun       Date:  2020-11-17       Impact factor: 14.919

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