Literature DB >> 26763875

Identification of a novel mutation confirms the implication of IFT172 (BBS20) in Bardet-Biedl syndrome.

Elise Schaefer1,2, Corinne Stoetzel1, Sophie Scheidecker1, Véronique Geoffroy1, Megana K Prasad1, Claire Redin3, Isabelle Missotte4, Didier Lacombe5, Jean-Louis Mandel3,6,7, Jean Muller1,6, Hélène Dollfus1,2.   

Abstract

Bardet-Biedl syndrome (BBS; MIM 209900) is a recessive heterogeneous ciliopathy characterized by retinitis pigmentosa (RP), postaxial polydactyly, obesity, hypogonadism, cognitive impairment and kidney dysfunction. So far, 20 BBS genes have been identified, with the last reported ones being found in one or very few families. Whole-exome sequencing was performed in a consanguineous family in which two affected children presented typical BBS features (retinitis pigmentosa, postaxial polydactyly, obesity, hypogonadism and cognitive impairment) without any mutation identified in known BBS genes at the time of the study. We identified a homozygous splice-site mutation (NM_015662.2: c.4428+3A>G) in both affected siblings in the last reported BBS gene, namely, Intraflagellar Transport 172 Homolog (IFT172). Familial mutation segregation was consistent with autosomal recessive inheritance. IFT172 mutations were initially reported in Jeune and Mainzer-Saldino syndromes. Recently, mutations have also been found in isolated RP and Bardet-Biedl-like ciliopathy. This is the second report of IFT172 mutations in BBS patients validating IFT172 as the twentieth BBS gene (BBS20). Moreover, another IFT gene, IFT27, was already associated with BBS, confirming the implication of IFT genes in the pathogenesis of BBS.

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Year:  2016        PMID: 26763875     DOI: 10.1038/jhg.2015.162

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  16 in total

1.  Exome sequencing of Bardet-Biedl syndrome patient identifies a null mutation in the BBSome subunit BBIP1 (BBS18).

Authors:  Sophie Scheidecker; Christelle Etard; Nathan W Pierce; Véronique Geoffroy; Elise Schaefer; Jean Muller; Kirsley Chennen; Elisabeth Flori; Valérie Pelletier; Olivier Poch; Vincent Marion; Corinne Stoetzel; Uwe Strähle; Maxence V Nachury; Hélène Dollfus
Journal:  J Med Genet       Date:  2013-09-11       Impact factor: 6.318

2.  Improved splice site detection in Genie.

Authors:  M G Reese; F H Eeckman; D Kulp; D Haussler
Journal:  J Comput Biol       Date:  1997       Impact factor: 1.479

3.  New criteria for improved diagnosis of Bardet-Biedl syndrome: results of a population survey.

Authors:  P L Beales; N Elcioglu; A S Woolf; D Parker; F A Flinter
Journal:  J Med Genet       Date:  1999-06       Impact factor: 6.318

4.  Delineation of the mechanisms of aberrant splicing caused by two unusual intronic mutations in the RSK2 gene involved in Coffin-Lowry syndrome.

Authors:  Maria Zeniou; Renata Gattoni; André Hanauer; James Stévenin
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

5.  Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals.

Authors:  Gene Yeo; Christopher B Burge
Journal:  J Comput Biol       Date:  2004       Impact factor: 1.479

6.  Different effects of Tetrahymena IFT172 domains on anterograde and retrograde intraflagellar transport.

Authors:  Che-Chia Tsao; Martin A Gorovsky
Journal:  Mol Biol Cell       Date:  2008-01-16       Impact factor: 4.138

7.  Defects in the IFT-B component IFT172 cause Jeune and Mainzer-Saldino syndromes in humans.

Authors:  Jan Halbritter; Albane A Bizet; Miriam Schmidts; Jonathan D Porath; Daniela A Braun; Heon Yung Gee; Aideen M McInerney-Leo; Pauline Krug; Emilie Filhol; Erica E Davis; Rannar Airik; Peter G Czarnecki; Anna M Lehman; Peter Trnka; Patrick Nitschké; Christine Bole-Feysot; Markus Schueler; Bertrand Knebelmann; Stéphane Burtey; Attila J Szabó; Kálmán Tory; Paul J Leo; Brooke Gardiner; Fiona A McKenzie; Andreas Zankl; Matthew A Brown; Jane L Hartley; Eamonn R Maher; Chunmei Li; Michel R Leroux; Peter J Scambler; Shing H Zhan; Steven J Jones; Hülya Kayserili; Beyhan Tuysuz; Khemchand N Moorani; Alexandru Constantinescu; Ian D Krantz; Bernard S Kaplan; Jagesh V Shah; Toby W Hurd; Dan Doherty; Nicholas Katsanis; Emma L Duncan; Edgar A Otto; Philip L Beales; Hannah M Mitchison; Sophie Saunier; Friedhelm Hildebrandt
Journal:  Am J Hum Genet       Date:  2013-10-17       Impact factor: 11.025

Review 8.  Ciliary disorder of the skeleton.

Authors:  Celine Huber; Valerie Cormier-Daire
Journal:  Am J Med Genet C Semin Med Genet       Date:  2012-07-12       Impact factor: 3.908

9.  Intrinsic protein-protein interaction-mediated and chaperonin-assisted sequential assembly of stable bardet-biedl syndrome protein complex, the BBSome.

Authors:  Qihong Zhang; Dahai Yu; Seongjin Seo; Edwin M Stone; Val C Sheffield
Journal:  J Biol Chem       Date:  2012-04-12       Impact factor: 5.157

10.  VaRank: a simple and powerful tool for ranking genetic variants.

Authors:  Véronique Geoffroy; Cécile Pizot; Claire Redin; Amélie Piton; Nasim Vasli; Corinne Stoetzel; André Blavier; Jocelyn Laporte; Jean Muller
Journal:  PeerJ       Date:  2015-03-03       Impact factor: 2.984

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  23 in total

1.  Ift172 conditional knock-out mice exhibit rapid retinal degeneration and protein trafficking defects.

Authors:  Priya R Gupta; Nachiket Pendse; Scott H Greenwald; Mihoko Leon; Qin Liu; Eric A Pierce; Kinga M Bujakowska
Journal:  Hum Mol Genet       Date:  2018-06-01       Impact factor: 6.150

Review 2.  Oral and Craniofacial Anomalies of Bardet-Biedl Syndrome: Dental Management in the Context of a Rare Disease.

Authors:  A Panny; I Glurich; R M Haws; A Acharya
Journal:  J Dent Res       Date:  2017-06-29       Impact factor: 6.116

Review 3.  The complexity of the cilium: spatiotemporal diversity of an ancient organelle.

Authors:  Westley Heydeck; Lorraine Fievet; Erica E Davis; Nicholas Katsanis
Journal:  Curr Opin Cell Biol       Date:  2018-08-20       Impact factor: 8.382

Review 4.  Bardet-Biedl Syndrome.

Authors:  Evgeny N Suspitsin; Evgeny N Imyanitov
Journal:  Mol Syndromol       Date:  2016-04-15

5.  Mouse spermatogenesis-associated protein 1 (SPATA1), an IFT20 binding partner, is an acrosomal protein.

Authors:  Ling Zhang; Jingkai Zhen; Qian Huang; Hong Liu; Wei Li; Shiyang Zhang; Jie Min; Yuhong Li; Lin Shi; James Woods; Xuequn Chen; Yuqin Shi; Yunhao Liu; Rex A Hess; Shizhen Song; Zhibing Zhang
Journal:  Dev Dyn       Date:  2020-01-02       Impact factor: 3.780

Review 6.  Obesity Genomics and Metabolomics: a Nexus of Cardiometabolic Risk.

Authors:  Jessica A Regan; Svati H Shah
Journal:  Curr Cardiol Rep       Date:  2020-10-10       Impact factor: 2.931

Review 7.  Cilia in cystic kidney and other diseases.

Authors:  Gregory J Pazour; Lynne Quarmby; Abigail O Smith; Paurav B Desai; Miriam Schmidts
Journal:  Cell Signal       Date:  2019-12-24       Impact factor: 4.315

8.  Murine germ cell-specific disruption of Ift172 causes defects in spermiogenesis and male fertility.

Authors:  Shiyang Zhang; Yunhao Liu; Qian Huang; Shuo Yuan; Hong Liu; Lin Shi; Yi Tian Yap; Wei Li; Jingkai Zhen; Ling Zhang; Rex A Hess; Zhibing Zhang
Journal:  Reproduction       Date:  2020-04       Impact factor: 3.906

Review 9.  Many Genes-One Disease? Genetics of Nephronophthisis (NPHP) and NPHP-Associated Disorders.

Authors:  Shalabh Srivastava; Elisa Molinari; Shreya Raman; John A Sayer
Journal:  Front Pediatr       Date:  2018-01-05       Impact factor: 3.418

10.  BBS4 regulates the expression and secretion of FSTL1, a protein that participates in ciliogenesis and the differentiation of 3T3-L1.

Authors:  Victoria Prieto-Echagüe; Sukanya Lodh; Laura Colman; Natalia Bobba; Leonardo Santos; Nicholas Katsanis; Carlos Escande; Norann A Zaghloul; Jose L Badano
Journal:  Sci Rep       Date:  2017-08-29       Impact factor: 4.379

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