| Literature DB >> 26763005 |
Marcelo A Sulzbacher1, Tine Grebenc2, Miguel Á García3, Bianca D Silva4, Andressa Silveira5, Zaida I Antoniolli5, Paulo Marinho6, Babette Münzenberger7, M Teresa Telleria8, Iuri G Baseia4, María P Martín9.
Abstract
The genus Rhizopogon includes species with hypogeous or subepigeus habit, forming ectomycorrhizae with naturally occurring or planted pines (Pinaceae). Species of the genus Rhizopogon can be distinguished easily from the other hypogeous basidiomycetes by their lacunose gleba without columella and their smooth elliptical spores; however, the limit between species is not always easy to establish. Rhizopogon luteolus, the type species of the genus, has been considered one of the species that are more abundant in Europe, as well as it has been cited in pine plantation of North and South America, different parts of Africa, Australia, and New Zealand. However, in this study, based on molecular analyses of the ITS nuclear ribosomal DNA (nrDNA) sequences (19 new sequences; 37 sequences from GenBank/UNITE, including those from type specimens), we prove that many GenBank sequences under R. luteolus were misidentified and correspond to Rhizopogon verii, a species described from Tunisia. Also, we confirm that basidiomes and ectomycorrhizae recently collected in Germany under Pinus sylvestris, as well as specimens from South of Brazil under Pinus taeda belong to R. verii. Thanks to the numerous ectomycorrhizal tips collected in Germany, a complete description of R. verii/P. sylvestris ectomycorrhiza is provided. Moreover, since in this paper the presence of R. verii in South America is here reported for the first time, a short description of basidiomes collected in Brazil, compared with collections located in different European herbaria, is included.Entities:
Keywords: Boletales; Ectomycorrhiza; Hypogeous fungi; Internal transcribed spacer; Phylogeny; Pinus sylvestris; Pinus taeda; nrDNA
Mesh:
Substances:
Year: 2016 PMID: 26763005 PMCID: PMC4909799 DOI: 10.1007/s00572-015-0678-8
Source DB: PubMed Journal: Mycorrhiza ISSN: 0940-6360 Impact factor: 3.387
Samples of Rhizopogon verii included in morphological and molecular analyses
| Herbarium number or EcM code | Origin | Coordinates | Collection date | Host | Isolation source | Accession number |
|---|---|---|---|---|---|---|
| UFRN-fungos 2371 | BR: Rio Grande do Sul, TAIM area | 52° 31′ 43.4″ N | 5 Jan 2012 |
| Basidiomes | n.d. |
| 32° 32′ 05″ E | ||||||
| UFRN-fungos 2372 (duplo URM 88223) | BR: Rio Grande do Sul, TAIM area | 52° 31′ 4.4″ N | 9 Jan 2013 |
| Basidiomes | LN875275 |
| 32° 32′ 05″ E | ||||||
| LJF 4035 | DE: Casel, Kozen | 51° 67′ 88.27″ N | 26 Sep 2014 |
| Basidiomes | LN875272 |
| 14° 15′ 65.71″ E | ||||||
| LJF 4003, LJF 4015, LJF 4022, LJF 4038, LJF 4039 | DE: Crinitz, village of Bergen | 51° 46′ 5.30″ N | 19 Oct 2013 |
| Basidiomes | LN875267 (LJF 4022) |
| 13° 44′ 46.22″ E | ||||||
| LJF 4031 | DE: Crinitz, NW from the village of Bergen | 51° 76′ 68.35″ N | 22 Sep 2014 |
| Basidiomes | n.d. |
| 13° 74′ 46.97″ E | ||||||
| LJF 4029 | DE: Crinitz, NW from the village of Bergen | 51° 76′ 71.30″ N | 22 Sep 2014 |
| Basidiomes | LN875271 |
| 13° 74′ 49.02″ E | ||||||
| LJF 4027 | DE: Crinitz, NW from the village of Bergen | 51° 76′ 66.19″ N | 22 Sep 2014 |
| Basidiomes | n.d. |
| 13° 74′ 45.91″ E | ||||||
| LJF 4030, LJF 4058 | DE: Gorden-Staupitz, Senftenberg strasse | 51° 52′ 84.04″ N | 24 Sep 2014 |
| Basidiomes | LN875273, LN875274 |
| 13° 65′ 54.99″ E | ||||||
| LJF4019, LJF 4036 | DE: Göritz, Drebkau | 51° 66′ 40.91″ N | 26 Sep 2014 |
| Basidiomes | n.d. |
| 14° 10′ 77.43″ E | ||||||
| LJF 4016, LJF 4055 (A), LJF 4055 (B), LJF 4055 (C) | DE: Hennersdorf | 51° 38′ 7.43″ N | 21 Oct 2013 |
| Basidiomes | LN875268, LN875264, LN875265, LN875266 |
| 13° 37′ 31.10″ E | ||||||
| LJF 4025, LJF 4032, LJF 4037, LJF 4041 | DE: Hennersdorf | 51° 63′ 54.69″ N | 23 Sep 2014 |
| Basidiomes | LN875269 (LJF 4025), LN875270 (LJF 4032) |
| 13° 62′ 43.10″ E | ||||||
| LJU-SFI-PSyl-2-2-1, LJU-SFI-PSyl-2-2-2, LJU-SFI-PSyl-2-2-3, LJU-SFI-PSyl-2-3-1, LJU-SFI-PSyl-2-3-3 | DE: Hennersdorf | n.d. | n.d. |
| Root tips | LN875259, LN875260, LN875261, LN875262, LN875263 |
| LJF 4014 | DE: Leippe | 51° 25′ 24.36″ N | 24 Oct 2014 |
| Basidiomes | n.d. |
| 14° 2′ 52.61″ E | ||||||
| LJF 4026, LJF 4042 | DE: Lugkteich (lake), Lower Lusatian Ridge Nature Park | 51° 72′ 38.07″ N | 27 Sep 2014 |
| Basidiomes | n.d. |
| 13° 58′ 85.12″ E |
BR Brazil, DE Germany, n.d. no data
Metadata from NCBI and UNITE sequences included in the molecular analyses
| Clades/Taxon names | Acc. Number NCBI or UNITE | Sequence name in databases | Isolation source | Origin | Host | Publication were the sequences Unpublished |
|---|---|---|---|---|---|---|
| Clade A | AB211261 | Uncultured ECM fungus | Root tip | Japan |
| Lian et al ( |
| AB253521 | Uncultured | Root tip | Japan:Tottori, Tottori sand dune |
| Taniguchi et al ( | |
| AB587765 | Uncultured ECM fungus | Root tip | South Korea: Kangwon-do |
| Obase et al ( | |
| Clade B | AF062936, neotype |
| Basidiome | Sweden: Uppsala |
| Grubisha et al ( |
| UDB008728 | ECM | Root tip | Estonia: Kuusnõmme |
| Unpublished | |
| UDB015830 |
| Basidiome | Estonia: Audaku, Saare | Mixed forest | Unpublished | |
| Clade C | AM085521 |
| Basidiome | Belgium: Limburg | Probably planted pines from Corsica | Unpublished |
| AM085531, Holotype |
| Basidiome | Tunisia: Tabarka |
| Martín and García ( | |
| DQ068966 | Uncultured ECM | Root tip | Lithuania |
| Menkis et al ( | |
| EU379676 |
| Root tip | Poland |
| Hilszczanska et al ( | |
| EU423919 |
| Basidiome | Spain |
| Hortal et al ( | |
| EU784397 |
| Basidiome | UK: Surrey | –a | Brock et al ( | |
| EU784398 |
| Basidiome | UK: South Hampshire | –a | Brock et al ( | |
| FJ013053 | Uncultured ECM ( | Root tip | Spain |
| Rincón & Pueyo ( | |
| FJ816742, FJ816745 | Uncultured | Root tip | Spain |
| Pestana & Santolamazza ( | |
| FJ876174 |
| Root tip | UK: England, Stoborough Heath National Nature Reserve |
| Collier & Bidartondo ( | |
| FN679020 | Uncultured | Root tip | Czech Republic: Bohemian Switzerland National Park |
| Kohout et al ( | |
| FN679021 | Uncultured | Root tip | Czech Republic: Bohemian Switzerland National Park |
| Kohout et al ( | |
| GQ205357 | Uncultured fungus | Root tip | Portugal |
| Buscardo et al ( | |
| GQ267481 |
| Basidiome | New Zealand |
| Walbert et al ( | |
| HM545731 | Uncultured fungus | Root tip | Italy |
| Buscardo et al ( | |
| HQ259630-HQ259639 | Uncultured ECM fungus | Root tip | Germany: Saxony-Anhalt, Duebener Heide, Roesa |
| Schulz et al ( | |
| HQ625448 | Uncultured fungus | Root tip | Portugal |
| Buscardo et al ( | |
| JQ888192 |
| Basidiome | UK: Scotland, Culbin forest |
| Pickles et al ( | |
| UDB001618 | ||||||
| JQ975973 | Uncultured fungus | Root tip | Spain |
| Rincón et al. ( | |
| Outgroup | AF062933 |
| Basidiome | USA: West Virginia |
| Grubisha et al ( |
aUnknown possible host
Fig. 1The 50 % majority-rule consensus tree of ITS nrDNA sequences of Rhizopogon luteolus and R. verii using Bayesian approach. A sequence of R. succosus was indicated as outgroup. Sequences from Rhizopogon luteolus and R. verii specimen types are marked in bold, as well as the accession numbers of the new sequences obtained in this study from Brazil and Germany. Numbers at the nodes indicate the percentage of boostrap values obtained from parsimony analysis with PAUP, and the posterior probabilities from the Bayesian analysis
Fig. 2Rhizopogon verii (UFRN-fungos 2372). a Basidiomes. b Longitudinal section of basidioma showing the gleba. c Surface of peridium showing the reddish rhizomorphs. Scale bars represent 20 mm (a) and 10 mm (b–c)
Fig. 3Rhizopogon verii (UFRN-fungos 2372). a Basidia. b Peridium showing differentiation of the outer and inner peridial layers. c Basidiospores. Scale bars represent 10 μm
Fig. 4Ectomycorrhiza Rhizopogon verii-Pinus sylvestris. a Habitus. b Longitudinal semi-thin section of the ectomycorrhiza Rhizopogon verii-Pinus sylvestris. CC central cylinder, HM hyphal mantle, HN Hartig net. Scale bars represent 2 mm (a) and 50 μm (b)
Fig. 5Anatomy of Rhizopogon verii ectomycorrhiza. a The outer mantle layers with septated, occasionally branched, and at distal ends inflated hyphae. b The middle mantle layers with hyphae arranged in broad streaks of parallel hyphae and gelatinous matrix present. c The pseudoparenchymatous inner mantle layers, hyphae arranged with no pattern and gelatinous matrix present. d Hyphal net over ectomycorrhiza. e Outer mantle layers. f Inner mantle layers of the very tip of ectomycorrhiza. Scale bars represent 10 μm (a, b, e, f) and 50 μm (c, d)
Fig. 6Anatomy of Rhizopogon verii ectomycorrhiza emanating elements. a Cystidia in the form of a normal hypha but twisted (type L). b Rhizomorphs differentiated with thick central hyphae and complete septa (type E). Scale bars represent 20 μm (a) and 10 μm (b)