Literature DB >> 26753997

Genetic oscillators in development.

Koichiro Uriu1.   

Abstract

In development, morphogenetic processes are strictly coordinated in time. Cells in a developing tissue would need mechanisms for time-keeping. One such time-keeping mechanism is to use oscillations of gene expression. Oscillatory gene expression can be generated by transcriptional/translational feedback loops, usually referred to as a genetic oscillator. In this review article, we discuss genetic oscillators in the presence of developmental processes such as cell division, cell movement and cell differentiation. We first introduce the gene regulatory network for generating a rhythm of gene expression. We then discuss how developmental processes influence genetic oscillators. Examples include vertebrate somitogenesis and neural progenitor cell differentiation, as well as the circadian clock for comparison. To understand the behaviors of genetic oscillators in development, it is necessary to consider both gene expression dynamics and cellular behaviors simultaneously. Theoretical modeling combined with live imaging at single-cell resolution will be a powerful tool to analyze genetic oscillators in development.
© 2016 Japanese Society of Developmental Biologists.

Keywords:  cell cycle; negative feedback loop; simulation; synchronization; time delays

Mesh:

Year:  2016        PMID: 26753997     DOI: 10.1111/dgd.12262

Source DB:  PubMed          Journal:  Dev Growth Differ        ISSN: 0012-1592            Impact factor:   2.053


  9 in total

1.  A myogenic motor pattern in mice lacking myenteric interstitial cells of Cajal explained by a second coupled oscillator network.

Authors:  Sean P Parsons; Jan D Huizinga
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2019-12-09       Impact factor: 4.052

2.  Simultaneous Requirements for Hes1 in Retinal Neurogenesis and Optic Cup-Stalk Boundary Maintenance.

Authors:  Bernadett Bosze; Myung-Soon Moon; Ryoichiro Kageyama; Nadean L Brown
Journal:  J Neurosci       Date:  2020-01-16       Impact factor: 6.167

3.  Feedback between a retinoid-related nuclear receptor and the let-7 microRNAs controls the pace and number of molting cycles in C. elegans.

Authors:  Ruhi Patel; Himani Galagali; John K Kim; Alison R Frand
Journal:  Elife       Date:  2022-08-15       Impact factor: 8.713

4.  Prss56 expression in the rodent hypothalamus: Inverse correlation with pro-opiomelanocortin suggests oscillatory gene expression in adult rat tanycytes.

Authors:  Gábor Wittmann; Ronald M Lechan
Journal:  J Comp Neurol       Date:  2018-09-22       Impact factor: 3.215

Review 5.  Ubiquitin-Dependent Regulation of Stem Cell Biology.

Authors:  Achim Werner; Andrew G Manford; Michael Rape
Journal:  Trends Cell Biol       Date:  2017-05-18       Impact factor: 20.808

6.  Increasing MinD's Membrane Affinity Yields Standing Wave Oscillations and Functional Gradients on Flat Membranes.

Authors:  Simon Kretschmer; Tamara Heermann; Andrea Tassinari; Philipp Glock; Petra Schwille
Journal:  ACS Synth Biol       Date:  2021-04-21       Impact factor: 5.110

7.  A framework for quantification and physical modeling of cell mixing applied to oscillator synchronization in vertebrate somitogenesis.

Authors:  Koichiro Uriu; Rajasekaran Bhavna; Andrew C Oates; Luis G Morelli
Journal:  Biol Open       Date:  2017-08-15       Impact factor: 2.422

8.  Developmental function and state transitions of a gene expression oscillator in Caenorhabditis elegans.

Authors:  Milou Wm Meeuse; Yannick P Hauser; Lucas J Morales Moya; Gert-Jan Hendriks; Jan Eglinger; Guy Bogaarts; Charisios Tsiairis; Helge Großhans
Journal:  Mol Syst Biol       Date:  2020-07       Impact factor: 11.429

Review 9.  Recent advances in understanding vertebrate segmentation.

Authors:  Tomás Pais-de-Azevedo; Ramiro Magno; Isabel Duarte; Isabel Palmeirim
Journal:  F1000Res       Date:  2018-01-23
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.