| Literature DB >> 26753754 |
Esmeralda Vizzi1, Gilberto Bastidas2,3,4, Mariana Hidalgo5, Laura Colman6, Hilda A Pérez7.
Abstract
BACKGROUND: Glucose-6-phosphate dehydrogenase (G6PD) deficiency causes acute haemolytic anaemia triggered by oxidative drugs such as primaquine (PQ), used for Plasmodium vivax malaria radical cure. However, in many endemic areas of vivax malaria, patients are treated with PQ without any evaluation of their G6PD status.Entities:
Mesh:
Year: 2016 PMID: 26753754 PMCID: PMC4710037 DOI: 10.1186/s12936-015-1069-5
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Fig. 1Map of Venezuela showing both municipalities included in the study of prevalence of G6PD deficiency. People studied were living in two malaria endemic regions of Venezuela, Sifontes municipality, in the southeast of Bolívar state, and Cajigal municipality, in the northeastern coastal plains of Sucre state, along the Caribbean
PCR/RFLP conditions used to identify the G6PD genetic variants of G6PDd unrelated individuals in the present study
| Mutations identified by PCR/RFLPa | Exon | Primer oligonucleotide sequence (5′–3′) | Amplicon sizeb (bp) | References | RFLP pattern (fragment size in bp) | ||
|---|---|---|---|---|---|---|---|
| REc | Wild-type | Mutantd | |||||
| 202G → A | 4 | GTGGCTGTTCCGGGATGGCCTTCTG | 109 | 29 |
| 109 | 63, 46 |
| 376A → G | 5 | CAGTACGATGATGCAGC | 90 |
| 90 | 58, 32 | |
| 563C → T | 6/7 | ACTCCCCGAAGAGGGGT | 542 | 30 |
| 25, 26, 119,377 | 25, 26, 100, 119, 277 |
| 844G → C | 8 | GGAGCTAAGGCGAGCTC | 230 |
| 11, 34, 75,110 | 11, 28, 47, 34,110 | |
RFLP restriction fragment length polymorphism analysis, bp base pairs, RE restriction endonuclease used for RFLP
aThe remaining mutations located in the exons 4–8, specifically the 185C → A, 542A → T, 592C → T, 593G → C, 634A → G, 637G → T, 680G → A, 820G → A, 835A → T, 854G → A and 871G → A, were studied by DNA sequencing
bCycling conditions used in the PCR were as follows: 40 cycles at 94 °C for 1 min, 60 °C (for exon 4 and 8) or 56 °C (for exon 5) or 58 °C (for exon 6/7) for 30 s, and 72 °C for 40 s. A final elongation at 72 °C for 7 min was added
cRestriction endonuclease digestion carried out with 5 U of enzyme at 37 °C for 3 h
d NlaIII, FokI or MboII recognition site is created by the mutation
Prevalence of G6PD deficiency in Venezuelan individuals from Sifontes and Cajigal municipalities and G6PD gene alleles from subjects with biochemical deficiency
| Geographical setting | Gender | TOTAL | G6PD determination results | ||||
|---|---|---|---|---|---|---|---|
| Biochemical test* | DNA analysis(**) | ||||||
| Normal(a) | G6PDd(#, b) | Wild-type allele | 202G → A allele | 376A → G allele | |||
| Cajigal municipality (Sucre state) | F | 163 | 156 (95.7) | 7 (4.3) | 3 | 4 | 4 |
| M | 169 | 156 (92.3) | 13 (7.7) | 1 | 11 | 12 | |
| Sifontes municipality (Bolívar state) | F | 164 | 163 (99.4) | 1 (0.6) | 1 | 0 | 0 |
| M | 168 | 165 (98.2) | 3 (1.8) | 0 | 2 | 3 | |
| 664 | 640 (96.4) | 24 (3.6) | 5 (20.8) | 17 (70.8) | 19 (79.2) | ||
Data are in number (percentage) of cases for each condition
F females, M males, G6PDd G6PD-deficient subjects
p = 0.001 by Fisher’s exact test for the comparison of G6PD deficiency prevalence among subjects of Cajigal vs. Sifontes municipality
* The biochemical test used was a NeoLiSA G6PD assay (Interscientific®, Hollywood, USA). p < 0.0001 by Student’s test for comparison of mean G6PD enzyme activity among normal and G6PDd subjects
** DNA analysis by PCR/RFLP and sequencing of the exons 4–8 of G6PD gene from subjects with biochemical deficiency. The other alleles, which were studied by sequencing (185C → A, 542A → T, 592C → T, 593G → C, 634A → G, 637G → T, 680G → A, 820G → A, 835A → T, 854G → A and 871G → A) resulted wild-type
aMean G6PD enzyme activity of 12.9 ± 3.8 U/g Hb [defined as Class IV (in 84 %) and V (in 2 %) (data not shown)], according to WHO criteria (33, 34)
bMean G6PD enzyme activity of 4.5 ± 1.2 U/g Hb (defined as moderately deficient enzyme, Class III, according to WHO criteria [33, 34]. p = 0.007 among G6PDd males and females compared by Student’s test