Literature DB >> 26752729

Fully automatic segmentation of left atrium and pulmonary veins in late gadolinium-enhanced MRI: Towards objective atrial scar assessment.

Qian Tao1, Esra Gucuk Ipek2, Rahil Shahzad1, Floris F Berendsen1, Saman Nazarian2, Rob J van der Geest1.   

Abstract

PURPOSE: To realize objective atrial scar assessment, this study aimed to develop a fully automatic method to segment the left atrium (LA) and pulmonary veins (PV) from late gadolinium-enhanced (LGE) magnetic resonance imaging (MRI). The extent and distribution of atrial scar, visualized by LGE-MRI, provides important information for clinical treatment of atrial fibrillation (AF) patients.
MATERIALS AND METHODS: Forty-six AF patients (age 62 ± 8, 14 female) who underwent cardiac MRI prior to RF ablation were included. A contrast-enhanced MR angiography (MRA) sequence was acquired for anatomy assessment followed by an LGE sequence for LA scar assessment. A fully automatic segmentation method was proposed consisting of two stages: 1) global segmentation by multiatlas registration; and 2) local refinement by 3D level-set. These automatic segmentation results were compared with manual segmentation.
RESULTS: The LA and PVs were automatically segmented in all subjects. Compared with manual segmentation, the method yielded a surface-to-surface distance of 1.49 ± 0.65 mm in the LA region when using both MRA and LGE, and 1.80 ± 0.93 mm when using LGE alone (P < 0.05). In the PV regions, the distance was 2.13 ± 0.67 mm and 2.46 ± 1.81 mm (P < 0.05), respectively. The difference between automatic and manual segmentation was comparable to the interobserver difference (P = 0.8 in LA region and P = 0.7 in PV region).
CONCLUSION: We developed a fully automatic method for LA and PV segmentation from LGE-MRI, with comparable performance to a human observer. Inclusion of an MRA sequence further improves the segmentation accuracy. The method leads to automatic generation of a patient-specific model, and potentially enables objective atrial scar assessment for AF patients. J. Magn. Reson. Imaging 2016;44:346-354.
© 2016 Wiley Periodicals, Inc.

Entities:  

Keywords:  LGE-MRI; MRA; automatic segmentation; left atrium; pulmonary veins

Mesh:

Substances:

Year:  2016        PMID: 26752729     DOI: 10.1002/jmri.25148

Source DB:  PubMed          Journal:  J Magn Reson Imaging        ISSN: 1053-1807            Impact factor:   4.813


  13 in total

1.  Fully Automatic Left Atrium Segmentation From Late Gadolinium Enhanced Magnetic Resonance Imaging Using a Dual Fully Convolutional Neural Network.

Authors:  Zhaohan Xiong; Vadim V Fedorov; Xiaohang Fu; Elizabeth Cheng; Rob Macleod; Jichao Zhao
Journal:  IEEE Trans Med Imaging       Date:  2019-02       Impact factor: 10.048

2.  Segmentation and visualization of left atrium through a unified deep learning framework.

Authors:  Xiuquan Du; Susu Yin; Renjun Tang; Yueguo Liu; Yuhui Song; Yanping Zhang; Heng Liu; Shuo Li
Journal:  Int J Comput Assist Radiol Surg       Date:  2020-02-26       Impact factor: 2.924

3.  A fully automated left atrium segmentation approach from late gadolinium enhanced magnetic resonance imaging based on a convolutional neural network.

Authors:  Davide Borra; Alice Andalò; Michelangelo Paci; Claudio Fabbri; Cristiana Corsi
Journal:  Quant Imaging Med Surg       Date:  2020-10

4.  Fully automated segmentation of the left atrium, pulmonary veins, and left atrial appendage from magnetic resonance angiography by joint-atlas-optimization.

Authors:  Menyun Qiao; Yuanyuan Wang; Floris F Berendsen; Rob J van der Geest; Qian Tao
Journal:  Med Phys       Date:  2019-03-22       Impact factor: 4.071

Review 5.  Mini Review: Deep Learning for Atrial Segmentation From Late Gadolinium-Enhanced MRIs.

Authors:  Kevin Jamart; Zhaohan Xiong; Gonzalo D Maso Talou; Martin K Stiles; Jichao Zhao
Journal:  Front Cardiovasc Med       Date:  2020-05-27

6.  Simultaneous left atrium anatomy and scar segmentations via deep learning in multiview information with attention.

Authors:  Guang Yang; Jun Chen; Zhifan Gao; Shuo Li; Hao Ni; Elsa Angelini; Tom Wong; Raad Mohiaddin; Eva Nyktari; Ricardo Wage; Lei Xu; Yanping Zhang; Xiuquan Du; Heye Zhang; David Firmin; Jennifer Keegan
Journal:  Future Gener Comput Syst       Date:  2020-06       Impact factor: 7.187

Review 7.  Artificial intelligence: improving the efficiency of cardiovascular imaging.

Authors:  Andrew Lin; Márton Kolossváry; Ivana Išgum; Pál Maurovich-Horvat; Piotr J Slomka; Damini Dey
Journal:  Expert Rev Med Devices       Date:  2020-06-16       Impact factor: 3.166

8.  Fully automatic segmentation and objective assessment of atrial scars for long-standing persistent atrial fibrillation patients using late gadolinium-enhanced MRI.

Authors:  Guang Yang; Xiahai Zhuang; Habib Khan; Shouvik Haldar; Eva Nyktari; Lei Li; Ricardo Wage; Xujiong Ye; Greg Slabaugh; Raad Mohiaddin; Tom Wong; Jennifer Keegan; David Firmin
Journal:  Med Phys       Date:  2018-03-15       Impact factor: 4.071

9.  Algorithms for left atrial wall segmentation and thickness - Evaluation on an open-source CT and MRI image database.

Authors:  Rashed Karim; Lauren-Emma Blake; Jiro Inoue; Qian Tao; Shuman Jia; R James Housden; Pranav Bhagirath; Jean-Luc Duval; Marta Varela; Jonathan M Behar; Loïc Cadour; Rob J van der Geest; Hubert Cochet; Maria Drangova; Maxime Sermesant; Reza Razavi; Oleg Aslanidi; Ronak Rajani; Kawal Rhode
Journal:  Med Image Anal       Date:  2018-08-24       Impact factor: 8.545

Review 10.  Deep Learning for Cardiac Image Segmentation: A Review.

Authors:  Chen Chen; Chen Qin; Huaqi Qiu; Giacomo Tarroni; Jinming Duan; Wenjia Bai; Daniel Rueckert
Journal:  Front Cardiovasc Med       Date:  2020-03-05
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