Literature DB >> 26744081

Effect of chirality in gamma-PNA: PNA interaction, another piece in the picture.

Alex Manicardi1, Roberto Corradini1.   

Abstract

Modification of the PNA backbone can be used to broaden their utility by introducing new functional groups. In particular, gamma-modified PNA have been found to be quite effective in a number of applications, and exhibit particularly high DNA binding affinity. The introduction of one side chain imply that the achiral backbone of PNA becomes chiral, and binding properties depend on the stereochemistry. A new paper on gamma-modified PNA by Ly and co-workers complete the existing knowledge by displaying that in binding to complementary PNA stereochemical orthogonality can be demonstrated. This opens the way to the exploitation of stereochemical features in diagnostic assays and in nanofabrication.

Entities:  

Keywords:  gamma-PNA; nanofabrication; orthogonality; self-assembly; stereochemistry

Mesh:

Substances:

Year:  2014        PMID: 26744081      PMCID: PMC5329894          DOI: 10.1080/1949095X.2015.1131801

Source DB:  PubMed          Journal:  Artif DNA PNA XNA        ISSN: 1949-095X


  22 in total

1.  As fast and selective as enzymatic ligations: unpaired nucleobases increase the selectivity of DNA-controlled native chemical PNA ligation.

Authors:  Simon Ficht; Christian Dose; Oliver Seitz
Journal:  Chembiochem       Date:  2005-11       Impact factor: 3.164

2.  Gamma-substituted peptide nucleic acids constructed from L-lysine are a versatile scaffold for multifunctional display.

Authors:  Ethan A Englund; Daniel H Appella
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

3.  Strand invasion of extended, mixed-sequence B-DNA by gammaPNAs.

Authors:  Gaofei He; Srinivas Rapireddy; Raman Bahal; Bichismita Sahu; Danith H Ly
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

4.  Strand invasion of mixed-sequence, double-helical B-DNA by γ-peptide nucleic acids containing G-clamp nucleobases under physiological conditions.

Authors:  Srinivas Rapireddy; Raman Bahal; Danith H Ly
Journal:  Biochemistry       Date:  2011-04-25       Impact factor: 3.162

5.  Insights into peptide nucleic acid (PNA) structural features: the crystal structure of a D-lysine-based chiral PNA-DNA duplex.

Authors:  Valeria Menchise; Giuseppina De Simone; Tullia Tedeschi; Roberto Corradini; Stefano Sforza; Rosangela Marchelli; Domenica Capasso; Michele Saviano; Carlo Pedone
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-25       Impact factor: 11.205

6.  Highly selective single nucleotide polymorphism recognition by a chiral (5S) PNA beacon.

Authors:  Filbert Totsingan; Tullia Tedeschi; Stefano Sforza; Roberto Corradini; Rosangela Marchelli
Journal:  Chirality       Date:  2009-01       Impact factor: 2.437

7.  Strand invasion of mixed-sequence B-DNA by acridine-linked, gamma-peptide nucleic acid (gamma-PNA).

Authors:  Srinivas Rapireddy; Gaofei He; Subhadeep Roy; Bruce A Armitage; Danith H Ly
Journal:  J Am Chem Soc       Date:  2007-11-21       Impact factor: 15.419

8.  Cellular uptakes, biostabilities and anti-miR-210 activities of chiral arginine-PNAs in leukaemic K562 cells.

Authors:  Alex Manicardi; Enrica Fabbri; Tullia Tedeschi; Stefano Sforza; Nicoletta Bianchi; Eleonora Brognara; Roberto Gambari; Rosangela Marchelli; Roberto Corradini
Journal:  Chembiochem       Date:  2012-05-25       Impact factor: 3.164

Review 9.  Chiral peptide nucleic acids with a substituent in the N-(2-aminoethy)glycine backbone.

Authors:  Toru Sugiyama; Atsushi Kittaka
Journal:  Molecules       Date:  2012-12-27       Impact factor: 4.411

Review 10.  Peptide nucleic acids in materials science.

Authors:  Davide Bonifazi; Laure-Elie Carloni; Valentina Corvaglia; Arnaud Delforge
Journal:  Artif DNA PNA XNA       Date:  2012-07-01
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  2 in total

1.  Head on Comparison of Self- and Nano-assemblies of Gamma Peptide Nucleic Acid Amphiphiles.

Authors:  Shipra Malik; Vikas Kumar; Chung-Hao Liu; Kuo-Chih Shih; Susan Krueger; Mu-Ping Nieh; Raman Bahal
Journal:  Adv Funct Mater       Date:  2021-11-05       Impact factor: 18.808

Review 2.  Perspectives on conformationally constrained peptide nucleic acid (PNA): insights into the structural design, properties and applications.

Authors:  Chaturong Suparpprom; Tirayut Vilaivan
Journal:  RSC Chem Biol       Date:  2022-03-18
  2 in total

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