Literature DB >> 26737183

Quantifying spatiotemporal complexity of cardiac dynamics using ordinal patterns.

Alexander Schlemmer, Sebastian Berg, T K Shajahan, Stefan Luther, Ulrich Parlitz.   

Abstract

Analyzing the dynamics of complex excitation wave patterns in cardiac tissue plays a key role for understanding the origin of life-threatening arrhythmias and for devising novel approaches to control them. The quantification of spatiotemporal complexity, however, remains a challenging task. This holds in particular for the analysis of data from fluorescence imaging (optical mapping), which allows for the measurement of membrane potential and intracellular calcium at high spatial and temporal resolution. Hitherto methods, like dominant frequency maps and the analysis of phase singularities, address important aspects of cardiac dynamics, but they consider very specific properties of excitable media, only. This article focuses on the benchmark of spatial complexity measures over time in the context of cardiac cell cultures. Standard Shannon Entropy and Spatial Permutation Entropy, an adaption of [1], have been implemented and applied to optical mapping data from embryonic chicken cell culture experiments. We introduce spatial separation of samples when generating ordinal patterns and show its importance for Spatial Permutation Entropy. Results suggest that Spatial Permutation Entropies provide a robust and interpretable measure for detecting qualitative changes in the dynamics of this excitable medium.

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Year:  2015        PMID: 26737183     DOI: 10.1109/EMBC.2015.7319283

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  1 in total

1.  Clustering patterns in efficiency and the coming-of-age of the cryptocurrency market.

Authors:  Higor Y D Sigaki; Matjaž Perc; Haroldo V Ribeiro
Journal:  Sci Rep       Date:  2019-02-05       Impact factor: 4.379

  1 in total

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