Literature DB >> 26736365

Detection of blur artifacts in histopathological whole-slide images of endomyocardial biopsies.

John H Phan, Ajay K Bhatia, Caitlin A Cundiff, Bahig M Shehata, May D Wang.   

Abstract

Histopathological whole-slide images (WSIs) have emerged as an objective and quantitative means for image-based disease diagnosis. However, WSIs may contain acquisition artifacts that affect downstream image feature extraction and quantitative disease diagnosis. We develop a method for detecting blur artifacts in WSIs using distributions of local blur metrics. As features, these distributions enable accurate classification of WSI regions as sharp or blurry. We evaluate our method using over 1000 portions of an endomyocardial biopsy (EMB) WSI. Results indicate that local blur metrics accurately detect blurry image regions.

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Year:  2015        PMID: 26736365      PMCID: PMC4983426          DOI: 10.1109/EMBC.2015.7318465

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  7 in total

Review 1.  A review of medical imaging informatics.

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2.  Revision of the 1990 working formulation for the standardization of nomenclature in the diagnosis of heart rejection.

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Journal:  J Heart Lung Transplant       Date:  2005-06-20       Impact factor: 10.247

3.  Use of whole slide imaging in surgical pathology quality assurance: design and pilot validation studies.

Authors:  Jonhan Ho; Anil V Parwani; Drazen M Jukic; Yukako Yagi; Leslie Anthony; John R Gilbertson
Journal:  Hum Pathol       Date:  2006-03       Impact factor: 3.466

4.  A no-reference objective image sharpness metric based on the notion of just noticeable blur (JNB).

Authors:  Rony Ferzli; Lina J Karam
Journal:  IEEE Trans Image Process       Date:  2009-04       Impact factor: 10.856

Review 5.  Histopathological image analysis: a review.

Authors:  Metin N Gurcan; Laura E Boucheron; Ali Can; Anant Madabhushi; Nasir M Rajpoot; B Yener
Journal:  IEEE Rev Biomed Eng       Date:  2009-10-30

Review 6.  Pathology imaging informatics for quantitative analysis of whole-slide images.

Authors:  Sonal Kothari; John H Phan; Todd H Stokes; May D Wang
Journal:  J Am Med Inform Assoc       Date:  2013-08-19       Impact factor: 4.497

7.  Eliminating tissue-fold artifacts in histopathological whole-slide images for improved image-based prediction of cancer grade.

Authors:  Sonal Kothari; John H Phan; May D Wang
Journal:  J Pathol Inform       Date:  2013-08-31
  7 in total
  2 in total

Review 1.  Machine Learning Methods for Histopathological Image Analysis.

Authors:  Daisuke Komura; Shumpei Ishikawa
Journal:  Comput Struct Biotechnol J       Date:  2018-02-09       Impact factor: 7.271

2.  Automated quality assessment of large digitised histology cohorts by artificial intelligence.

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Journal:  Sci Rep       Date:  2022-03-23       Impact factor: 4.379

  2 in total

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