| Literature DB >> 26733294 |
Jiawei Wang1, Dongzi Zhu1, Yue Tan1, Xiaojuan Zong1, Hairong Wei1, Rosemarie W Hammond2, Qingzhong Liu3.
Abstract
Little cherry virus 1 (LChV-1), associated with little cherry disease (LCD), has a significant impact on fruit quality of infected sweet cherry trees. We report the full genome sequence of an isolate of LChV-1 from Taian, China (LChV-1-TA), detected by small-RNA deep sequencing and amplified by overlapping RT-PCR. The LChV-1-TA genome was 16,932 nt in length and contained nine open reading frames (ORFs), with sequence identity at the overall genome level of 76%, 76%, and 78% to LChV-1 isolates Y10237 (UW2 isolate), EU715989 (ITMAR isolate) and JX669615 (V2356 isolate), respectively. Based on the phylogenetic analysis of HSP70h amino acid sequences of Closteroviridae family members, LChV-1-TA was grouped into a well-supported cluster with the members of the genus Velarivirus and was also closely related to other LChV-1 isolates. This is the first report of the complete nucleotide sequence of LChV-1 infecting sweet cherry in China.Entities:
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Year: 2016 PMID： 26733294 DOI： 10.1007/s00705-015-2737-z
Source DB: PubMed Journal: Arch Virol ISSN： 0304-8608 Impact factor: 2.574