Literature DB >> 26732032

How soft is a single protein? The stress-strain curve of antibody pentamers with 5 pN and 50 pm resolutions.

Alma P Perrino1, Ricardo Garcia1.   

Abstract

Understanding the mechanical functionalities of complex biological systems requires the measurement of the mechanical compliance of their smallest components. Here, we develop a force microscopy method to quantify the softness of a single antibody pentamer by measuring the stress-strain curve with force and deformation resolutions, respectively, of 5 pN and 50 pm. The curve shows three distinctive regions. For ultrasmall compressive forces (5-75 pN), the protein's central region shows that the strain and stress are proportional (elastic regime). This region has an average Young's modulus of 2.5 MPa. For forces between 80 and 220 pN, the stress is roughly proportional to the strain with a Young's modulus of 9 MPa. Higher forces lead to irreversible deformations (plastic regime). Full elastic recovery could reach deformations amounting to 40% of the protein height. The existence of two different elastic regions is explained in terms of the structure of the antibody central region. The stress-strain curve explains the capability of the antibody to sustain multiple collisions without any loss of biological functionality.

Mesh:

Substances:

Year:  2016        PMID: 26732032     DOI: 10.1039/c5nr07957h

Source DB:  PubMed          Journal:  Nanoscale        ISSN: 2040-3364            Impact factor:   7.790


  8 in total

1.  Flexible Nanoparticles Reach Sterically Obscured Endothelial Targets Inaccessible to Rigid Nanoparticles.

Authors:  Jacob W Myerson; Bruce Braender; Olivia Mcpherson; Patrick M Glassman; Raisa Y Kiseleva; Vladimir V Shuvaev; Oscar Marcos-Contreras; Martha E Grady; Hyun-Su Lee; Colin F Greineder; Radu V Stan; Russell J Composto; David M Eckmann; Vladimir R Muzykantov
Journal:  Adv Mater       Date:  2018-06-28       Impact factor: 30.849

2.  Immunoactivity of self-assembled antibodies investigated by atomic force microscopy.

Authors:  Hiroaki Kominami; Kei Kobayashi; Shinichiro Ido; Hirokazu Kimiya; Hirofumi Yamada
Journal:  RSC Adv       Date:  2018-08-20       Impact factor: 4.036

3.  Kinematic Flexibility Analysis: Hydrogen Bonding Patterns Impart a Spatial Hierarchy of Protein Motion.

Authors:  Dominik Budday; Sigrid Leyendecker; Henry van den Bedem
Journal:  J Chem Inf Model       Date:  2018-10-09       Impact factor: 4.956

4.  Molecular-scale visualization and surface charge density measurement of Z-DNA in aqueous solution.

Authors:  Hiroaki Kominami; Kei Kobayashi; Hirofumi Yamada
Journal:  Sci Rep       Date:  2019-05-02       Impact factor: 4.379

Review 5.  Job Opening for Nucleosome Mechanic: Flexibility Required.

Authors:  Mary Pitman; Daniël P Melters; Yamini Dalal
Journal:  Cells       Date:  2020-03-01       Impact factor: 6.600

6.  Label-free characterization of an extracellular vesicle-based therapeutic.

Authors:  Eleni Priglinger; Juergen Strasser; Boris Buchroithner; Florian Weber; Susanne Wolbank; Daniela Auer; Eva Grasmann; Claudia Arzt; Dmitry Sivun; Johannes Grillari; Jaroslaw Jacak; Johannes Preiner; Mario Gimona
Journal:  J Extracell Vesicles       Date:  2021-10

7.  Biophysical properties of single rotavirus particles account for the functions of protein shells in a multilayered virus.

Authors:  Manuel Jiménez-Zaragoza; Marina Pl Yubero; Esther Martín-Forero; Jose R Castón; David Reguera; Daniel Luque; Pedro J de Pablo; Javier M Rodríguez
Journal:  Elife       Date:  2018-09-11       Impact factor: 8.140

8.  Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners.

Authors:  Daniël P Melters; Mary Pitman; Tatini Rakshit; Emilios K Dimitriadis; Minh Bui; Garegin A Papoian; Yamini Dalal
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-11       Impact factor: 11.205

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.