Literature DB >> 26731511

Oxidative Deamination of N-Acetyl Neuraminic Acid: Substituent Effects and Mechanism.

Szymon Buda1, David Crich1.   

Abstract

A study of the mechanism of the oxidative deamination of the N-nitroso-N-acetyl sialyl glycosides leading with overall retention of configuration to the corresponding 2-keto-3-deoxy-D-glycero-D-galacto-nonulopyranosidonic acid (KDN) glycosides is described, making use of a series of differentially O-protected N-nitroso-N-acetyl sialyl glycosides and of isotopic labeling studies. No evidence is found for stereodirecting participation by ester groups at the 4- and 7-positions. Comparisons are drawn with oxidative deamination reactions of 4-amino-4-deoxy and 2-amino-2-deoxy hexopyranosides and a common mechanism is formulated involving the intermediacy of 1-oxabicyclo[3.1.0]hexyl oxonium ions following participation by the pyranoside ring oxygen. A minor reaction pathway has been uncovered by labeling studies in the β-thiosialosides that results in the exchange of the 4-O-acetyl group by the glacial acetic acid that serves as external nucleophile in the general oxidative deamination process. A mechanism is proposed for this exchange involving participation by the thioglycoside at the level of an intermediate diazoalkane.

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Year:  2016        PMID: 26731511      PMCID: PMC4732528          DOI: 10.1021/jacs.5b13015

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  34 in total

1.  Stereoselective synthesis of alpha-keto-deoxy-D-glycero-D-galacto-nonulosonic acid glycosides by means of the 4,5-O-carbonate protecting group.

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Journal:  Angew Chem Int Ed Engl       Date:  2010-04-12       Impact factor: 15.336

2.  Cell-surface carbohydrates and their interactions. I. NMR or N-acetyl neuraminic acid.

Authors:  E B Brown; W S Brey; W Weltner
Journal:  Biochim Biophys Acta       Date:  1975-07-14

Review 3.  Advances in the biology and chemistry of sialic acids.

Authors:  Xi Chen; Ajit Varki
Journal:  ACS Chem Biol       Date:  2010-02-19       Impact factor: 5.100

Review 4.  Effect of electron-withdrawing protecting groups at remote positions of donors on glycosylation stereochemistry.

Authors:  Kwan Soo Kim; Dae-Hwan Suk
Journal:  Top Curr Chem       Date:  2011

5.  Stereoselective synthesis of oligo-alpha-(2,8)-sialic acids.

Authors:  Hiroshi Tanaka; Yuji Nishiura; Takashi Takahashi
Journal:  J Am Chem Soc       Date:  2006-06-07       Impact factor: 15.419

6.  Perimycin: chemistry of perosamine.

Authors:  C H Lee; C P Schaffner
Journal:  Tetrahedron Lett       Date:  1966-11       Impact factor: 2.415

7.  Studies on the carbohydrate moiety of 1 -acid glycoprotein (orosomucoid) by using alkaline hydrolysis and deamination by nitrous acid.

Authors:  M Isemura; K Schmid
Journal:  Biochem J       Date:  1971-09       Impact factor: 3.857

8.  Reinvestigation of the synthesis of 4-methylcoumarin-7-yl 5-acetamido-3,5-dideoxy-alpha-D-glycero-D-galacto-2-nonulopyranosidonic acid, a fluorogenic substrate for neuraminidase.

Authors:  N Baggett; B J Marsden
Journal:  Carbohydr Res       Date:  1982-11-16       Impact factor: 2.104

9.  Does neighboring group participation by non-vicinal esters play a role in glycosylation reactions? Effective probes for the detection of bridging intermediates.

Authors:  David Crich; Tianshun Hu; Feng Cai
Journal:  J Org Chem       Date:  2008-10-22       Impact factor: 4.354

10.  Combinatorial chemoenzymatic synthesis and high-throughput screening of sialosides.

Authors:  Harshal A Chokhawala; Shengshu Huang; Kam Lau; Hai Yu; Jiansong Cheng; Vireak Thon; Nancy Hurtado-Ziola; Juan A Guerrero; Ajit Varki; Xi Chen
Journal:  ACS Chem Biol       Date:  2008-08-27       Impact factor: 5.100

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  14 in total

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Authors:  Harsha Amarasekara; David Crich
Journal:  Carbohydr Res       Date:  2016-10-08       Impact factor: 2.104

2.  Trifluoromethanesulfonate Anion as Nucleophile in Organic Chemistry.

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Journal:  J Org Chem       Date:  2017-09-05       Impact factor: 4.354

3.  Stereoselective Synthesis of the Equatorial Glycosides of Legionaminic Acid.

Authors:  Oskar Popik; Bibek Dhakal; David Crich
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4.  Use of Phenols as Nucleophiles in the Zbiral Oxidative Deamination of N-Acetyl Neuraminic Acid: Isolation and Characterization of Tricyclic 3-Keto-2-deoxy-nonulosonic Acid (KDN) Derivatives via an Intermediate Vinyl Diazonium Ion.

Authors:  Mohammed Hawsawi; Anura Wickramasinghe; David Crich
Journal:  J Org Chem       Date:  2019-10-29       Impact factor: 4.354

5.  Stereoselective Synthesis of 5-epi-α-Sialosides Related to the Pseudaminic Acid Glycosides. Reassessment of the Stereoselectivity of the 5-Azido-5-deacetamidosialyl Thioglycosides and Use of Triflate as Nucleophile in the Zbiral Deamination of Sialic Acids.

Authors:  Bibek Dhakal; Szymon Buda; David Crich
Journal:  J Org Chem       Date:  2016-11-10       Impact factor: 4.354

6.  Oxidative deamination of amino sugars: recent advances.

Authors:  Vikram A Sarpe; David Crich
Journal:  Carbohydr Chem       Date:  2001-03-06

7.  Synthesis of saccharocin from apramycin and evaluation of its ribosomal selectivity.

Authors:  Vikram A Sarpe; Michael G Pirrone; Klara Haldimann; Sven N Hobbie; Andrea Vasella; David Crich
Journal:  Medchemcomm       Date:  2019-03-13       Impact factor: 3.597

8.  Synthesis and Stereocontrolled Equatorially Selective Glycosylation Reactions of a Pseudaminic Acid Donor: Importance of the Side-Chain Conformation and Regioselective Reduction of Azide Protecting Groups.

Authors:  Bibek Dhakal; David Crich
Journal:  J Am Chem Soc       Date:  2018-10-25       Impact factor: 15.419

9.  Use of hydroxylamines, hydroxamic acids, oximes and amines as nucleophiles in the Zbiral oxidative deamination of N-acetyl neuraminic acid. Isolation and characterization of novel mono- and disubstitution products.

Authors:  Mohammed Hawsawi; Michael G Pirrone; Anura Wickramasinghe; David Crich
Journal:  Carbohydr Res       Date:  2020-01-25       Impact factor: 2.104

10.  Synthesis of 4-O-Alkylated N-Acetylneuraminic Acid Derivatives.

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Journal:  J Org Chem       Date:  2021-06-17       Impact factor: 4.354

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