| Literature DB >> 26731283 |
Guo-Qing Bai1,2, Tao Zhou2, Ji-Xiang Zhao2, Wei-Min Li1, Gui-Jun Han1, Si-Feng Li1.
Abstract
The complete chloroplast genome of Kolkwitzia amabilis (Caprifoliaceae) is first presented in the current study. The cp genome of K. amabilis was 156 875 bp in length and composed of two short inverted repeat (IRa and IRb) regions of 23 946 bp which were separated by a small single copy (SSC) region of 18 846 bp and a large single copy (LSC) region of 90 137 bp. The genome encoded 130 genes contained 81 coding genes, 39 tRNA genes, and 8 rRNA genes. The overall AT content of K. amabilis is 61.6% and the corresponding values of the SSC, LSC and IR regions are 66.8%, 64.1%, and 57.3%, respectively. The phylogenetic analysis based on the maximum parsimony tree revealed that K. amabilis was closely related to Lonicera japonica.Entities:
Keywords: Complete chloroplast genome; Kolkwitzia amabilis; high-throughput sequencing (HTS)
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Year: 2016 PMID： 26731283 DOI： 10.3109/19401736.2015.1118087
Source DB: PubMed Journal: Mitochondrial DNA A DNA Mapp Seq Anal ISSN： 2470-1394 Impact factor: 1.514