Literature DB >> 26727897

Studies on seasonal dynamics of soil-higher fungal communities in Mongolian oak-dominant Gwangneung forest in Korea.

Chang Sun Kim1, Jong Woo Nam1, Jong Won Jo1, Sang-Yong Kim1, Jae-Gu Han2, Min Woo Hyun2, Gi-Ho Sung3, Sang-Kuk Han4.   

Abstract

We surveyed macrofungi biweekly at defined plots from April to December in 2014, in the Mongolian oak-dominant forest, Gwangneung Forest, Pochen-si, Korea, and analyzed a soilhigher fungal diversity during four seasons (represented by April, August, October, and December). Based on morphological observation of collected specimens, the collected macrofungi were classified into 2 phyla 3 classes 7 orders, 14 families, 21 genera, and 33 species (36 specimens). DNA-based community analyses indicated that soil-higher fungi were classified into 2 phyla, 18 classes, 49 orders, 101 families, and 155 genera (83,360 sequence reads), defined herein as 155 genus-level operational taxonomic units (GOTUs). In the present study, we evaluated and discussed the fungal diversity in seasonal dynamics and soil layers based on collected macrofungi and pyrosequencing data while considering environmental parameters (pH, exchangeable K, T-P, NH 4 (+) , NO 3 (-) , OM, WR, TOC, and T-N). Moreover, principal components analysis (PCA) showed distinct clusters of the GOTU assemblage associated with the seasons.

Entities:  

Keywords:  diversity; environmental parameters; macrofungi; pyrosequencing; soil layers

Mesh:

Substances:

Year:  2016        PMID: 26727897     DOI: 10.1007/s12275-016-5521-1

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  14 in total

1.  Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi.

Authors:  Conrad L Schoch; Keith A Seifert; Sabine Huhndorf; Vincent Robert; John L Spouge; C André Levesque; Wen Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-27       Impact factor: 11.205

2.  Soil bacterial and fungal communities across a pH gradient in an arable soil.

Authors:  Johannes Rousk; Erland Bååth; Philip C Brookes; Christian L Lauber; Catherine Lozupone; J Gregory Caporaso; Rob Knight; Noah Fierer
Journal:  ISME J       Date:  2010-05-06       Impact factor: 10.302

3.  Massively parallel 454-sequencing of fungal communities in Quercus spp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites.

Authors:  Ari Jumpponen; Kenneth L Jones; J David Mattox; Chulee Yaege
Journal:  Mol Ecol       Date:  2010-03       Impact factor: 6.185

4.  Assessment of soil fungal communities using pyrosequencing.

Authors:  Young Woon Lim; Byung Kwon Kim; Changmu Kim; Hack Sung Jung; Bong-Soo Kim; Jae-Hak Lee; Jongsik Chun
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

5.  Bacterial immobilization and remineralization of N at different growth rates and N concentrations.

Authors:  Per Bengtson; Göran Bengtsson
Journal:  FEMS Microbiol Ecol       Date:  2005-09-01       Impact factor: 4.194

6.  Seasonal dynamics of fungal communities in a temperate oak forest soil.

Authors:  Jana Voříšková; Vendula Brabcová; Tomáš Cajthaml; Petr Baldrian
Journal:  New Phytol       Date:  2013-09-06       Impact factor: 10.151

7.  Biodegradation of C-labeled model and cornstalk lignins, phenols, model phenolase humic polymers, and fungal melanins as influenced by a readily available carbon source and soil.

Authors:  J P Martin; K Haider
Journal:  Appl Environ Microbiol       Date:  1979-08       Impact factor: 4.792

Review 8.  Diversity meets decomposition.

Authors:  Mark O Gessner; Christopher M Swan; Christian K Dang; Brendan G McKie; Richard D Bardgett; Diana H Wall; Stephan Hättenschwiler
Journal:  Trends Ecol Evol       Date:  2010-02-26       Impact factor: 17.712

9.  The fungi: 1, 2, 3 ... 5.1 million species?

Authors:  Meredith Blackwell
Journal:  Am J Bot       Date:  2011-03-02       Impact factor: 3.844

Review 10.  Metagenomic pyrosequencing and microbial identification.

Authors:  Joseph F Petrosino; Sarah Highlander; Ruth Ann Luna; Richard A Gibbs; James Versalovic
Journal:  Clin Chem       Date:  2009-03-05       Impact factor: 8.327

View more
  3 in total

1.  One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation.

Authors:  Huaihai Chen; Zamin K Yang; Dan Yip; Reese H Morris; Steven J Lebreux; Melissa A Cregger; Dawn M Klingeman; Dafeng Hui; Robert L Hettich; Steven W Wilhelm; Gangsheng Wang; Frank E Löffler; Christopher W Schadt
Journal:  PLoS One       Date:  2019-06-18       Impact factor: 3.240

2.  Guild Patterns of Basidiomycetes Community Associated With Quercus mongolica in Mt. Jeombong, Republic of Korea.

Authors:  Seung-Yoon Oh; Hae Jin Cho; John A Eimes; Sang-Kuk Han; Chang Sun Kim; Young Woon Lim
Journal:  Mycobiology       Date:  2018-03-29       Impact factor: 1.858

3.  Seasonal Change in Microbial Diversity and Its Relationship with Soil Chemical Properties in an Orchard.

Authors:  Xuhui Luo; Ming Kuang Wang; Guiping Hu; Boqi Weng
Journal:  PLoS One       Date:  2019-12-31       Impact factor: 3.240

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.