Literature DB >> 26719334

Structural and Mechanistic Insights into the Regulation of the Fundamental Rho Regulator RhoGDIα by Lysine Acetylation.

Nora Kuhlmann1, Sarah Wroblowski1, Philipp Knyphausen1, Susanne de Boor1, Julian Brenig1, Anke Y Zienert2, Katrin Meyer-Teschendorf2, Gerrit J K Praefcke3, Hendrik Nolte1, Marcus Krüger1, Magdalena Schacherl4, Ulrich Baumann4, Leo C James5, Jason W Chin5, Michael Lammers6.   

Abstract

Rho proteins are small GTP/GDP-binding proteins primarily involved in cytoskeleton regulation. Their GTP/GDP cycle is often tightly connected to a membrane/cytosol cycle regulated by the Rho guanine nucleotide dissociation inhibitor α (RhoGDIα). RhoGDIα has been regarded as a housekeeping regulator essential to control homeostasis of Rho proteins. Recent proteomic screens showed that RhoGDIα is extensively lysine-acetylated. Here, we present the first comprehensive structural and mechanistic study to show how RhoGDIα function is regulated by lysine acetylation. We discover that lysine acetylation impairs Rho protein binding and increases guanine nucleotide exchange factor-catalyzed nucleotide exchange on RhoA, these two functions being prerequisites to constitute a bona fide GDI displacement factor. RhoGDIα acetylation interferes with Rho signaling, resulting in alteration of cellular filamentous actin. Finally, we discover that RhoGDIα is endogenously acetylated in mammalian cells, and we identify CBP, p300, and pCAF as RhoGDIα-acetyltransferases and Sirt2 and HDAC6 as specific deacetylases, showing the biological significance of this post-translational modification.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Ras homolog gene family, member A (RhoA); Rho (Rho GTPase); acetylation; acetyltransferase; guanine-nucleotide-dissociation inhibitor alpha; histone deacetylase (HDAC); lysine acetylation; lysine acetyltransferase; post-translational modification (PTM); sirtuin

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Year:  2015        PMID: 26719334      PMCID: PMC4786691          DOI: 10.1074/jbc.M115.707091

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

1.  The Rac-RhoGDI complex and the structural basis for the regulation of Rho proteins by RhoGDI.

Authors:  K Scheffzek; I Stephan; O N Jensen; D Illenberger; P Gierschik
Journal:  Nat Struct Biol       Date:  2000-02

2.  Phosphorylation of RhoGDI by Src regulates Rho GTPase binding and cytosol-membrane cycling.

Authors:  Céline DerMardirossian; Gabriel Rocklin; Ji-Yeon Seo; Gary M Bokoch
Journal:  Mol Biol Cell       Date:  2006-08-30       Impact factor: 4.138

3.  Rapid measurement of binding constants and heats of binding using a new titration calorimeter.

Authors:  T Wiseman; S Williston; J F Brandts; L N Lin
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

4.  A single residue can modify target-binding affinity and activity of the functional domain of the Rho-subfamily GDP dissociation inhibitors.

Authors:  J V Platko; D A Leonard; C N Adra; R J Shaw; R A Cerione; B Lim
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips.

Authors:  Juri Rappsilber; Matthias Mann; Yasushi Ishihama
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

7.  Better models by discarding data?

Authors:  K Diederichs; P A Karplus
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-15

8.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  23 in total

1.  Structure-based analysis of the guanine nucleotide exchange factor SmgGDS reveals armadillo-repeat motifs and key regions for activity and GTPase binding.

Authors:  Hikaru Shimizu; Sachiko Toma-Fukai; Shinya Saijo; Nobutaka Shimizu; Kenji Kontani; Toshiaki Katada; Toshiyuki Shimizu
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

2.  Assessment of roles for the Rho-specific guanine nucleotide dissociation inhibitor Ly-GDI in platelet function: a spatial systems approach.

Authors:  Anh T P Ngo; Marisa L D Thierheimer; Özgün Babur; Anne D Rocheleau; Tao Huang; Jiaqing Pang; Rachel A Rigg; Annachiara Mitrugno; Dan Theodorescu; Julja Burchard; Xiaolin Nan; Emek Demir; Owen J T McCarty; Joseph E Aslan
Journal:  Am J Physiol Cell Physiol       Date:  2017-02-01       Impact factor: 4.249

3.  Germline or inducible knockout of p300 or CBP in skeletal muscle does not alter insulin sensitivity.

Authors:  Vitor F Martins; Jessica R Dent; Kristoffer Svensson; Shahriar Tahvilian; Maedha Begur; Shivani Lakkaraju; Elisa H Buckner; Samuel A LaBarge; Byron Hetrick; Carrie E McCurdy; Simon Schenk
Journal:  Am J Physiol Endocrinol Metab       Date:  2019-03-19       Impact factor: 4.310

4.  GEF mechanism revealed by the structure of SmgGDS-558 and farnesylated RhoA complex and its implication for a chaperone mechanism.

Authors:  Hikaru Shimizu; Sachiko Toma-Fukai; Kenji Kontani; Toshiaki Katada; Toshiyuki Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-06       Impact factor: 11.205

Review 5.  A molecular engineering toolbox for the structural biologist.

Authors:  Galia T Debelouchina; Tom W Muir
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

6.  A direct interaction between RhoGDIα/Tau alleviates hyperphosphorylation of Tau in Alzheimer's disease and vascular dementia.

Authors:  Heping Zhang; Fan Lu; Panhong Liu; Zhaohui Qiu; Jianling Li; Xiaotong Wang; Hui Xu; Yandong Zhao; Xuemin Li; Huadong Wang; Daxiang Lu; Renbin Qi
Journal:  J Neuroimmune Pharmacol       Date:  2022-01-26       Impact factor: 4.147

7.  Critical review of non-histone human substrates of metal-dependent lysine deacetylases.

Authors:  Tasha B Toro; Terry J Watt
Journal:  FASEB J       Date:  2020-08-30       Impact factor: 5.191

8.  Insights into Lysine Deacetylation of Natively Folded Substrate Proteins by Sirtuins.

Authors:  Philipp Knyphausen; Susanne de Boor; Nora Kuhlmann; Lukas Scislowski; Antje Extra; Linda Baldus; Magdalena Schacherl; Ulrich Baumann; Ines Neundorf; Michael Lammers
Journal:  J Biol Chem       Date:  2016-05-18       Impact factor: 5.157

Review 9.  Regulation of RhoA GTPase and novel target proteins for ROCK.

Authors:  Eun-Kyoung Choi; Jae-Gyu Kim; Hee-Jun Kim; Jung-Yoon Cho; Hwalrim Jeong; Yohan Park; Rokibul Islam; Cuong Kim Cap; Jae-Bong Park
Journal:  Small GTPases       Date:  2017-12-03

10.  Regulation of RhoA activation and cytoskeletal organization by acetylation.

Authors:  Arzu Ulu; Jeffrey A Frost
Journal:  Small GTPases       Date:  2016-04-12
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