Literature DB >> 26710250

The first complete chloroplast genome sequence from Violaceae (Viola seoulensis).

Kyeong-Sik Cheon1, Jong-Cheol Yang2, Kyung-Ah Kim1, Su-Kil Jang3, Ki-Oug Yoo1.   

Abstract

The complete chloroplast genome of Viola seoulensis, an endemic species to Korea, was determined in this study. The total genome size was 156 507 bp in length, containing a pair of inverted repeats (IRs) of 26 404 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 85 691 and 18 008 bp, respectively. The overall GC contents of the plastid genome were 36.3%. One hundred and thirty genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. In these genes, 17 genes contained one or two introns. A phylogenetic tree showed that Violaceae was closely related to Salicaceae.

Entities:  

Keywords:  Complete chloroplast genome; Viola seoulensis; Violaceae; endemic species

Mesh:

Substances:

Year:  2015        PMID: 26710250     DOI: 10.3109/19401736.2015.1110801

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  5 in total

1.  The Linum usitatissimum L. plastome reveals atypical structural evolution, new editing sites, and the phylogenetic position of Linaceae within Malpighiales.

Authors:  Amanda de Santana Lopes; Túlio Gomes Pacheco; Karla Gasparini Dos Santos; Leila do Nascimento Vieira; Miguel Pedro Guerra; Rubens Onofre Nodari; Emanuel Maltempi de Souza; Fábio de Oliveira Pedrosa; Marcelo Rogalski
Journal:  Plant Cell Rep       Date:  2017-10-30       Impact factor: 4.570

2.  Complete chloroplast genome sequence of Caryocar brasiliense Camb. (Caryocaraceae) and comparative analysis brings new insights into the plastome evolution of Malpighiales.

Authors:  Rhewter Nunes; Ueric José Borges de Souza; Cintia Pelegrineti Targueta; Rafael Barbosa Pinto; Thannya Nascimento Soares; José Alexandre Felizola Diniz-Filho; Mariana Pires de Campos Telles
Journal:  Genet Mol Biol       Date:  2020       Impact factor: 1.771

3.  The evolutionary fate of rpl32 and rps16 losses in the Euphorbia schimperi (Euphorbiaceae) plastome.

Authors:  Aldanah A Alqahtani; Robert K Jansen
Journal:  Sci Rep       Date:  2021-04-02       Impact factor: 4.379

4.  The complete plastome of tropical fruit Garcinia mangostana (Clusiaceae).

Authors:  Sangjin Jo; Hoe-Won Kim; Young-Kee Kim; Jung-Yeon Sohn; Se-Hwan Cheon; Ki-Joong Kim
Journal:  Mitochondrial DNA B Resour       Date:  2017-10-18       Impact factor: 0.658

5.  An integrated study of Violae Herba (Viola philippica) and five adulterants by morphology, chemical compositions and chloroplast genomes: insights into its certified plant origin.

Authors:  Gengyu Lu; Juanjuan Qiao; Long Wang; Hui Liu; Gang Wu; Yan Zhu; Yucheng Zhao; Guoyong Xie; Minjian Qin
Journal:  Chin Med       Date:  2022-03-03       Impact factor: 5.455

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.