Literature DB >> 26707213

The complete mitochondrial genome of Epicauta chinensis (Coleoptera: Meloidae) and phylogenetic analysis among Coleopteran insects.

Chao Du1, Shilin He1, Xuhao Song1, Qi Liao2, Xiuyue Zhang1, Bisong Yue3.   

Abstract

The blister beetle is an important resource insect due to its defensive substance cantharidin, which was widely used in pharmacology and plant protection. We determined the complete mitochondrial genome of Epicauta chinensis Laporte (Coleoptera: Tenebrionoidae: Meloidae). The circular genome is 15,717 bp long, encoding 13 protein-coding genes (PCGs), two ribosomal RNAs and 22 tRNAs and containing a A+T-rich region with gene arrangement identical to other Coleopteran species. Twelve PCGs start with typical ATN codon, while ATP8 gene initiate with GTT for first report in Insecta. All PCGs terminate with conventional stop codon TAA or TAG. All tRNAs in E. chinensis are predicted to fold into typical cloverleaf secondary structure, except tRNA-Ser(AGN), in which the dihydrouracil arm (DHU arm) could not form stable stem-loop structure. The secondary structure of lrRNA and srRNA comprises 48 helices and 32 helices respectively. The 1101 bp A+T-rich region contains a 15 bp poly-T stretch and microsatellite-like repeats rather than large tandem repetitive sequences. Phylogenetic analysis, based on 13 PCGs of 45 Coleopteran species, show that E. chinensis grouped with Tenebrionidae species. It also support the topology of (((Chrysomelidae+Curculionoidea)+(Cucujoidea+Cleroidea))+Tenebrionoidea) within Cucujiformia.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Complete sequence; Epicauta chinensis; Mitochondrial genome; Molecular phylogeny

Mesh:

Substances:

Year:  2015        PMID: 26707213     DOI: 10.1016/j.gene.2015.12.036

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  12 in total

1.  Phylogenetic Implication of Large Intergenic Spacers: Insights from a Mitogenomic Comparison of Prosopocoilus Stag Beetles (Coleoptera: Lucanidae).

Authors:  Mengqiong Xu; Shiju Zhou; Xia Wan
Journal:  Animals (Basel)       Date:  2022-06-21       Impact factor: 3.231

2.  Mitochondrial genomes of blister beetles (Coleoptera, Meloidae) and two large intergenic spacers in Hycleus genera.

Authors:  Chao Du; Lifang Zhang; Ting Lu; Jingnan Ma; Chenjuan Zeng; Bisong Yue; Xiuyue Zhang
Journal:  BMC Genomics       Date:  2017-09-06       Impact factor: 3.969

3.  New Mitogenomes of Two Chinese Stag Beetles (Coleoptera, Lucanidae) and Their Implications for Systematics.

Authors:  Zi-Qi Lin; Fan Song; Teng Li; Yuan-Yuan Wu; Xia Wan
Journal:  J Insect Sci       Date:  2017-01-01       Impact factor: 1.857

4.  Complete mitochondrial genomes of two blattid cockroaches, Periplaneta australasiae and Neostylopyga rhombifolia, and phylogenetic relationships within the Blattaria.

Authors:  Jinnan Ma; Chao Du; Chuang Zhou; Yongmei Sheng; Zhenxin Fan; Bisong Yue; Xiuyue Zhang
Journal:  PLoS One       Date:  2017-05-09       Impact factor: 3.240

5.  Gene characteristics of the complete mitochondrial genomes of Paratoxodera polyacantha and Toxodera hauseri (Mantodea: Toxoderidae).

Authors:  Le-Ping Zhang; Yin-Yin Cai; Dan-Na Yu; Kenneth B Storey; Jia-Yong Zhang
Journal:  PeerJ       Date:  2018-04-19       Impact factor: 2.984

6.  The mitochondrial genomes of two walnut pests, Gastrolina depressa depressa and G. depressa thoracica (Coleoptera: Chrysomelidae), and phylogenetic analyses.

Authors:  Qiqi Wang; Guanghui Tang
Journal:  PeerJ       Date:  2018-06-05       Impact factor: 2.984

7.  Complete Mitogenome of a Leaf-Mining Buprestid Beetle, Trachys auricollis, and Its Phylogenetic Implications.

Authors:  Lifang Xiao; Shengdi Zhang; Chengpeng Long; Qingyun Guo; Jiasheng Xu; Xiaohua Dai; Jianguo Wang
Journal:  Genes (Basel)       Date:  2019-12-01       Impact factor: 4.096

8.  Phylogenetic relationship and characterization of the complete mitochondrial genome of Mylabris calida (Coleoptera:Meloidae).

Authors:  Ming Jiang; Qian Wei; Wenqiang Wang
Journal:  Mitochondrial DNA B Resour       Date:  2020-10-05       Impact factor: 0.658

9.  Structural Features and Phylogenetic Implications of Three New Mitochondrial Genomes of Blister Beetles (Coleoptera: Meloidae).

Authors:  Zhicheng Zhou; Yangyang Liu; Xiangsheng Chen
Journal:  J Insect Sci       Date:  2021-11-01       Impact factor: 1.857

10.  Comparative analysis of the complete mitochondrial genomes of three rockfishes (Scorpaeniformes, Sebastiscus) and insights into the phylogenetic relationships of Sebastidae.

Authors:  Chenghao Jia; Xiumei Zhang; Shengyong Xu; Tianyan Yang; Takashi Yanagimoto; Tianxiang Gao
Journal:  Biosci Rep       Date:  2020-12-23       Impact factor: 3.840

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