Literature DB >> 26704427

Mismatch binding, ADP-ATP exchange and intramolecular signaling during mismatch repair.

Manju M Hingorani1.   

Abstract

The focus of this article is on the DNA binding and ATPase activities of the mismatch repair (MMR) protein, MutS-our current understanding of how this protein uses ATP to fuel its actions on DNA and initiate repair via interactions with MutL, the next protein in the pathway. Structure-function and kinetic studies have yielded detailed views of the MutS mechanism of action in MMR. How MutS and MutL work together after mismatch recognition to enable strand-specific nicking, which leads to strand excision and synthesis, is less clear and remains an active area of investigation.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  ATPase mechanism; Mismatch repair; MutL; MutS; Transient kinetics

Mesh:

Substances:

Year:  2015        PMID: 26704427      PMCID: PMC4740199          DOI: 10.1016/j.dnarep.2015.11.017

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  93 in total

1.  Biochemical characterization of the interaction between the Saccharomyces cerevisiae MSH2-MSH6 complex and mispaired bases in DNA.

Authors:  G T Marsischky; R D Kolodner
Journal:  J Biol Chem       Date:  1999-09-17       Impact factor: 5.157

2.  Composite active site of an ABC ATPase: MutS uses ATP to verify mismatch recognition and authorize DNA repair.

Authors:  M S Junop; G Obmolova; K Rausch; P Hsieh; W Yang
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

3.  hMSH2-hMSH6 forms a hydrolysis-independent sliding clamp on mismatched DNA.

Authors:  S Gradia; D Subramanian; T Wilson; S Acharya; A Makhov; J Griffith; R Fishel
Journal:  Mol Cell       Date:  1999-02       Impact factor: 17.970

Review 4.  DNA mismatch repair and genetic instability.

Authors:  B D Harfe; S Jinks-Robertson
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

5.  The crystal structure of DNA mismatch repair protein MutS binding to a G x T mismatch.

Authors:  M H Lamers; A Perrakis; J H Enzlin; H H Winterwerp; N de Wind; T K Sixma
Journal:  Nature       Date:  2000-10-12       Impact factor: 49.962

6.  Interaction of Escherichia coli MutS and MutL at a DNA mismatch.

Authors:  M J Schofield; S Nayak; T H Scott; C Du; P Hsieh
Journal:  J Biol Chem       Date:  2001-05-22       Impact factor: 5.157

7.  Requirement for Phe36 for DNA binding and mismatch repair by Escherichia coli MutS protein.

Authors:  A Yamamoto; M J Schofield; I Biswas; P Hsieh
Journal:  Nucleic Acids Res       Date:  2000-09-15       Impact factor: 16.971

8.  Mismatch recognition and DNA-dependent stimulation of the ATPase activity of hMutSalpha is abolished by a single mutation in the hMSH6 subunit.

Authors:  P Dufner; G Marra; M Räschle; J Jiricny
Journal:  J Biol Chem       Date:  2000-11-24       Impact factor: 5.157

9.  Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair.

Authors:  C Ban; M Junop; W Yang
Journal:  Cell       Date:  1999-04-02       Impact factor: 41.582

10.  Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA.

Authors:  G Obmolova; C Ban; P Hsieh; W Yang
Journal:  Nature       Date:  2000-10-12       Impact factor: 49.962

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  14 in total

1.  Mechanism of formation of a toroid around DNA by the mismatch sensor protein.

Authors:  Shivlee Nirwal; Dhananjaya S Kulkarni; Amit Sharma; Desirazu N Rao; Deepak T Nair
Journal:  Nucleic Acids Res       Date:  2018-01-09       Impact factor: 16.971

2.  Recurrent mismatch binding by MutS mobile clamps on DNA localizes repair complexes nearby.

Authors:  Pengyu Hao; Sharonda J LeBlanc; Brandon C Case; Timothy C Elston; Manju M Hingorani; Dorothy A Erie; Keith R Weninger
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-15       Impact factor: 11.205

Review 3.  Eukaryotic Mismatch Repair in Relation to DNA Replication.

Authors:  Thomas A Kunkel; Dorothy A Erie
Journal:  Annu Rev Genet       Date:  2015       Impact factor: 16.830

4.  Single-Molecule FRET to Measure Conformational Dynamics of DNA Mismatch Repair Proteins.

Authors:  J W Gauer; S LeBlanc; P Hao; R Qiu; B C Case; M Sakato; M M Hingorani; D A Erie; K R Weninger
Journal:  Methods Enzymol       Date:  2016-10-05       Impact factor: 1.600

Review 5.  Endonuclease activities of MutLα and its homologs in DNA mismatch repair.

Authors:  Lyudmila Y Kadyrova; Farid A Kadyrov
Journal:  DNA Repair (Amst)       Date:  2015-12-02

Review 6.  Roles for mismatch repair family proteins in promoting meiotic crossing over.

Authors:  Carol M Manhart; Eric Alani
Journal:  DNA Repair (Amst)       Date:  2015-12-02

7.  Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.

Authors:  Federico Cerullo; Sebastian Filbeck; Pratik Rajendra Patil; Hao-Chih Hung; Haifei Xu; Julia Vornberger; Florian W Hofer; Jaro Schmitt; Guenter Kramer; Bernd Bukau; Kay Hofmann; Stefan Pfeffer; Claudio A P Joazeiro
Journal:  Nature       Date:  2022-03-09       Impact factor: 69.504

8.  Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein.

Authors:  Bharat Lakhani; Kelly M Thayer; Manju M Hingorani; David L Beveridge
Journal:  J Phys Chem B       Date:  2017-02-24       Impact factor: 2.991

9.  Coordinated protein and DNA conformational changes govern mismatch repair initiation by MutS.

Authors:  Sharonda J LeBlanc; Jacob W Gauer; Pengyu Hao; Brandon C Case; Manju M Hingorani; Keith R Weninger; Dorothy A Erie
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

10.  DNA mutation motifs in the genes associated with inherited diseases.

Authors:  Michal Růžička; Petr Kulhánek; Lenka Radová; Andrea Čechová; Naďa Špačková; Lenka Fajkusová; Kamila Réblová
Journal:  PLoS One       Date:  2017-08-02       Impact factor: 3.240

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