Literature DB >> 26700371

Untangling the phylogeny of Leandra s.str. (Melastomataceae, Miconieae).

Marcelo Reginato1, Fabián A Michelangeli2.   

Abstract

Phylogenetic studies in Melastomataceae have demonstrated the need for taxonomic rearrangements in the current classification. Nonetheless, melastomes are among the most diverse groups of plants and several cases of known artificial taxa have been observed and awaiting further resolution. The Leandra s.str. clade, with ca. 200 species, includes the majority of the taxa traditionally treated in the genus Leandra and is almost restricted to eastern Brazil. In earlier studies, some attempts have been made to infer the relationships within Leandra s.str., but the sampling was sparse and the resolution low inside the clade. Here, we attempt to provide an improved phylogenetic hypothesis for this group on which to base further studies. Specifically, we provide a comprehensive taxon sampling and attempt to infer a species tree for this group, dissecting potential noise in the phylogenetic reconstruction, such as paralogy, rogue taxa, hybridization and incomplete lineage sorting. Our data set includes 126 ingroup species (192 terminals) and four partitions (six markers). We implement the (∗)BEAST model for species tree inference and perform several simulation methods to assess model fit and to discuss potential causes for the observed patterns. Major lineages of Leandra s.str. were delineated, a strictly bifurcating species tree model seems to not account for the observed data, and hybridization is very likely an important evolutionary force in this group.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  (∗)BEAST; Hybridization; Leandra; Melastomataceae; Multispecies coalescent; Rogues

Mesh:

Year:  2015        PMID: 26700371     DOI: 10.1016/j.ympev.2015.11.015

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  7 in total

1.  Revision of the Lima clade (Miconia sect. Lima, Miconieae, Melastomataceae) of the Greater Antilles.

Authors:  Lucas C Majure; Eldis R Bécquer; Walter S Judd
Journal:  PhytoKeys       Date:  2016-10-13       Impact factor: 1.635

2.  Diversity and constraints in the floral morphological evolution of Leandra s.str. (Melastomataceae).

Authors:  Marcelo Reginato; Fabián A Michelangeli
Journal:  Ann Bot       Date:  2016-07-10       Impact factor: 4.357

3.  Untangling inflorescences in Miconieae (Melastomataceae): development, typology, and the systematic and evolutionary implications.

Authors:  Talvanis Lorenzetti Freire; Beatriz do Nascimento Valente; Karen L G De Toni; José Fernando A Baumgratz
Journal:  J Plant Res       Date:  2022-01-07       Impact factor: 2.629

4.  A framework for near-real time monitoring of diversity patterns based on indirect remote sensing, with an application in the Brazilian Atlantic rainforest.

Authors:  Andrea Paz; Thiago S Silva; Ana C Carnaval
Journal:  PeerJ       Date:  2022-06-29       Impact factor: 3.061

5.  The first complete plastid genomes of Melastomataceae are highly structurally conserved.

Authors:  Marcelo Reginato; Kurt M Neubig; Lucas C Majure; Fabian A Michelangeli
Journal:  PeerJ       Date:  2016-11-29       Impact factor: 2.984

6.  A two-tier bioinformatic pipeline to develop probes for target capture of nuclear loci with applications in Melastomataceae.

Authors:  Johanna R Jantzen; Prabha Amarasinghe; Ryan A Folk; Marcelo Reginato; Fabian A Michelangeli; Douglas E Soltis; Nico Cellinese; Pamela S Soltis
Journal:  Appl Plant Sci       Date:  2020-05-09       Impact factor: 1.936

Review 7.  Life barcoded by DNA barcodes.

Authors:  Mali Guo; Chaohai Yuan; Leyan Tao; Yafei Cai; Wei Zhang
Journal:  Conserv Genet Resour       Date:  2022-08-15       Impact factor: 0.991

  7 in total

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