Literature DB >> 26697886

Characterization and Structural Insights into Selective E1-E2 Interactions in the Human and Plasmodium falciparum SUMO Conjugation Systems.

Katherine H Reiter1, Anita Ramachandran1, Xue Xia1, Lauren E Boucher2, Jürgen Bosch2, Michael J Matunis3.   

Abstract

Protein modification by small ubiquitin-related modifiers (SUMOs) is essential and conserved in the malaria parasite, Plasmodium falciparum. We have previously shown that interactions between the SUMO E1-activating and E2-conjugating enzyme in P. falciparum are distinct compared with human, suggesting a potential target for development of parasite-specific inhibitors of SUMOylation. The parasite asexual trophozoite stage is susceptible to iron-induced oxidative stress and is subsequently a target for many of the current anti-malarial drugs. Here, we provide evidence that SUMOylation plays a role in the parasite response to oxidative stress during red blood cell stages, indicative of a protective role seen in other organisms. Using x-ray crystallography, we solved the structure of the human SUMO E1 ubiquitin fold domain in complex with the E2, Ubc9. The interface defined in this structure guided in silico modeling, mutagenesis, and in vitro biochemical studies of the P. falciparum SUMO E1 and E2 enzymes, resulting in the identification of surface residues that explain species-specific interactions. Our findings suggest that parasite-specific inhibitors of SUMOylation could be developed and used in combination therapies with drugs that induce oxidative stress.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  crystallography; malaria; oxidative stress; plasmodium; small ubiquitin-like modifier (SUMO); ubiquitin fold domain (Ufd); ubiquitin-conjugating enzyme (E2 enzyme)

Mesh:

Substances:

Year:  2015        PMID: 26697886      PMCID: PMC4759166          DOI: 10.1074/jbc.M115.680801

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

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2.  Structural characterisation and functional significance of transient protein-protein interactions.

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Journal:  J Mol Biol       Date:  2003-01-31       Impact factor: 5.469

3.  Insights into the ubiquitin transfer cascade from the structure of the activating enzyme for NEDD8.

Authors:  Helen Walden; Michael S Podgorski; Brenda A Schulman
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4.  Structures of the SUMO E1 provide mechanistic insights into SUMO activation and E2 recruitment to E1.

Authors:  Luisa Maria Lois; Christopher D Lima
Journal:  EMBO J       Date:  2005-01-20       Impact factor: 11.598

Review 5.  Concepts in sumoylation: a decade on.

Authors:  Ruth Geiss-Friedlander; Frauke Melchior
Journal:  Nat Rev Mol Cell Biol       Date:  2007-12       Impact factor: 94.444

6.  Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes.

Authors:  Imsang Lee; Hermann Schindelin
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

7.  Structure of a ubiquitin E1-E2 complex: insights to E1-E2 thioester transfer.

Authors:  Shaun K Olsen; Christopher D Lima
Journal:  Mol Cell       Date:  2013-02-14       Impact factor: 17.970

8.  Functional characterization of a SUMO deconjugating protease of Plasmodium falciparum using newly identified small molecule inhibitors.

Authors:  Elizabeth L Ponder; Victoria E Albrow; Brittany A Leader; Miklós Békés; Jowita Mikolajczyk; Urša Pečar Fonović; Aimee Shen; Marcin Drag; Junpeng Xiao; Edgar Deu; Amy J Campbell; James C Powers; Guy S Salvesen; Matthew Bogyo
Journal:  Chem Biol       Date:  2011-06-24

9.  Identification of biochemically distinct properties of the small ubiquitin-related modifier (SUMO) conjugation pathway in Plasmodium falciparum.

Authors:  Katherine Reiter; Debaditya Mukhopadhyay; Hong Zhang; Lauren E Boucher; Nirbhay Kumar; Jürgen Bosch; Michael J Matunis
Journal:  J Biol Chem       Date:  2013-08-13       Impact factor: 5.157

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3.  Implications of critical node-dependent unidirectional cross-talk of Plasmodium SUMO pathway proteins.

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Journal:  Biophys J       Date:  2022-03-21       Impact factor: 3.699

4.  Structural analysis and evolution of specificity of the SUMO UFD E1-E2 interactions.

Authors:  Bing Liu; L Maria Lois; David Reverter
Journal:  Sci Rep       Date:  2017-02-06       Impact factor: 4.379

5.  Molecular mechanism of K65 acetylation-induced attenuation of Ubc9 and the NDSM interaction.

Authors:  Mandar T Naik; Mooseok Kang; Chun-Chen Ho; Pei-Hsin Liao; Yung-Lin Hsieh; Nandita M Naik; Szu-Huan Wang; Iksoo Chang; Hsiu-Ming Shih; Tai-Huang Huang
Journal:  Sci Rep       Date:  2017-12-12       Impact factor: 4.379

Review 6.  Ubiquitin-like Protein Conjugation: Structures, Chemistry, and Mechanism.

Authors:  Laurent Cappadocia; Christopher D Lima
Journal:  Chem Rev       Date:  2017-02-24       Impact factor: 60.622

7.  Plasmodium falciparum Resistance to a Lead Benzoxaborole Due to Blocked Compound Activation and Altered Ubiquitination or Sumoylation.

Authors:  Kirthana M V Sindhe; Wesley Wu; Jenny Legac; Yong-Kang Zhang; Eric E Easom; Roland A Cooper; Jacob J Plattner; Yvonne R Freund; Joseph L DeRisi; Philip J Rosenthal
Journal:  mBio       Date:  2020-01-28       Impact factor: 7.867

Review 8.  (De)Activation (Ir)Reversibly or Degradation: Dynamics of Post-Translational Protein Modifications in Plants.

Authors:  Victor Muleya; L Maria Lois; Hicham Chahtane; Ludivine Thomas; Marco Chiapello; Claudius Marondedze
Journal:  Life (Basel)       Date:  2022-02-21

Review 9.  Targeting SUMOylation in Plasmodium as a Potential Target for Malaria Therapy.

Authors:  Daffiny Sumam de Oliveira; Thales Kronenberger; Giuseppe Palmisano; Carsten Wrenger; Edmarcia Elisa de Souza
Journal:  Front Cell Infect Microbiol       Date:  2021-06-10       Impact factor: 5.293

Review 10.  Ubiquitin-Like Modifiers: Emerging Regulators of Protozoan Parasites.

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  10 in total

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