Literature DB >> 26695714

The evaluation of loop-mediated isothermal amplification-quartz crystal microbalance (LAMP-QCM) biosensor as a real-time measurement of HPV16 DNA.

Patcharee Jearanaikoon1, Preeda Prakrankamanant2, Chanvit Leelayuwat3, Surasak Wanram2, Temduang Limpaiboon3, Chamras Promptmas4.   

Abstract

We have previously developed quartz crystal microbalance biosensor integrated with loop-mediated isothermal amplification (LAMP-QCM) for human papillomavirus (HPV) type58 DNA detection. Infection with HPV, particularly HPV16, remains a serious health problem due to its major risk factor contributing to cervical cancer. In the present study, LAMP-QCM biosensor was evaluated in terms of a quantitative assay for copy number of HPV16 DNA in cervical samples compared to quantitative PCR using TaqMan assay (TaqMan-qPCR). The detection limit of LAMP-QCM was found to be 10 fold more sensitive than TaqMan-qPCR with 100% specificity and 7.6% imprecision. Different plot of HPV16 DNA copy number using Bland-Altman analysis revealed 94% correlation between LAMP-QCM and qPCR. We therefore concluded that the developed LAMP-QCM biosensor provides a possible rapid and sensitive assay for HPV16 DNA quantification in a routine laboratory.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cervical cancer; HPV16 DNA measurement; Loop-mediated isothermal amplification; Probe-free biosensor; Quartz crystal microbalance; TaqMan-qPCR

Mesh:

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Year:  2015        PMID: 26695714     DOI: 10.1016/j.jviromet.2015.12.005

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  3 in total

1.  Development of a LAMP assay using a portable device for the real-time detection of cotton leaf curl disease in field conditions.

Authors:  Amna Rafiq; Waqas Rafique Ali; Muhammad Asif; Nasim Ahmed; Waheed S Khan; Shahid Mansoor; Sadia Zafar Bajwa; Imran Amin
Journal:  Biol Methods Protoc       Date:  2021-05-06

2.  End-to-end computational approach to the design of RNA biosensors for detecting miRNA biomarkers of cervical cancer.

Authors:  Priyannth Ramasami S Baabu; Shivaramakrishna Srinivasan; Swetha Nagarajan; Sangeetha Muthamilselvan; Thamarai Selvi; Raghavv R Suresh; Ashok Palaniappan
Journal:  Synth Syst Biotechnol       Date:  2022-04-04

3.  DNA Biosensor Based on Double-Layer Discharge for the Detection of HPV Type 16.

Authors:  José R Espinosa; Marisol Galván; Arturo S Quiñones; Jorge L Ayala; Sergio M Durón
Journal:  Sensors (Basel)       Date:  2019-09-13       Impact factor: 3.576

  3 in total

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