| Literature DB >> 26690224 |
Yan Xiao1,2, Mei-Hua Bao3, Huai-Qing Luo4, Ju Xiang5, Jian-Ming Li6.
Abstract
Ischemic stroke (IS) is responsible for a high death rate and for adult disability worldwide. MiR-146a (rs2910164), miR-149 (rs2292832), miR-196a2 (rs11614913) and miR-499 (rs3746444) are found to be associated with ischemic stroke. However, the results were inconsistent and inconclusive. The present study performed a meta-analysis to get a more precise and comprehensive estimation of the association between the four polymorphisms and IS risk. The databases Pubmed, Embase, Cochrane Central Register of Controlled Trials, Chinese National Knowledge Infrastructure, and Chinese Biomedical Literature Database were searched for related studies. A total of five studies including 2230 cases and 2229 controls were identified for the meta-analysis. The results indicate that TT genotype and T allele of miR-149 (rs2292832) are associated with significantly lower risks of IS in a homozygous model (OR = 0.70) and an allelic model (OR = 0.86). No significant associations were found between miR-146a (rs2910164), miR-196a2 (rs11614913), miR-499 (3746444) and IS susceptibility in any of the studies. However, subgroup analysis by sample size indicates a significant decrease in risks of IS for CC genotype and C allele of miR-146a (rs2910164) in the large sample size group. Therefore, miR-149 (rs2292832) might be recommended as a predictor for IS risk, while miR-146a (rs2910164), miR-196a2 (rs11614913), miR-499 (3746444) are not.Entities:
Keywords: ischemic stroke; meta-analysis; miR-146a; miR-149; miR-196a2; miR-499; polymorphism
Year: 2015 PMID: 26690224 PMCID: PMC4690041 DOI: 10.3390/genes6041283
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
Figure 1PRISMA flow chart of studies inclusion and exclusion.
Characteristics of eligible studies included in the meta-analysis.
| Zhu [ | 2014 | China | Chinese | PCR-LDR | 253:115/261:120 | 61.62 ± 0.986/62.05 ± 0.982 | 12 | 368/381 | 50/64 | 173/185 | 145/132 | 0.384 | volunteers |
| Liu [ | 2014 | China | Chinese | PCR-RFLP | 180:116/127:193 | 67.52 ± 10.29/66.34 ± 11.07 | 12 | 296/391 | 52/77 | 159/198 | 85/116 | 0.650 | volunteers |
| Jeon [ | 2013 | South Korea | Korean | Taqman | 336:342/244:309 | 64.16 ± 11.90/63.14 ± 10.19 | 12 | 678/553 | 128/76 | 327/266 | 223/211 | 0.589 | IS-free patients |
| Huang [ | 2015 | China | Chinese | Taqman | 327:204/327:204 | 63 (54, 70)/61 (54, 68) | 13 | 531/531 | 81/55 | 261/257 | 189/219 | 0.106 | volunteers |
| Jeon [ | 2013 | South Korea | Korean | Taqman | 336:342/244:309 | 64.16 ± 11.90/63.14 ± 10.19 | 12 | 678/553 | 299/262 | 303/238 | 76/53 | 0.589 | IS-free patients |
| He [ | 2013 | China | Chinese | PCR-RFLP | 205:168/193:180 | 65.7 ± 11.5/66.3 ± 10.2 | 12 | 357/373 | 138/160 | 162/175 | 57/38 | 0.327 | volunteers |
| Zhu [ | 2014 | China | Chinese | PCR-LDR | 253:115/261:120 | 61.62 ± 0.986/62.05 ± 0.982 | 12 | 368/381 | 71/78 | 189/198 | 108/105 | 0.384 | volunteers |
| Liu [ | 2014 | China | Chinese | PCR-RFLP | 180:116/127:193 | 67.52 ± 10.29/66.34 ± 11.07 | 12 | 296/391 | 51/84 | 181/214 | 64/93 | 0.650 | volunteers |
| Jeon [ | 2013 | South Korea | Korean | Taqman | 336:342/244:309 | 64.16 ± 11.90/63.14 ± 10.19 | 12 | 678/553 | 139/105 | 352/292 | 187/156 | 0.589 | IS-free patients |
| Huang [ | 2015 | China | Chinese | Taqman | 327:204/327:204 | 63 (54, 70)/61 (54, 68) | 13 | 531/531 | 100/112 | 265/266 | 166/153 | 0.106 | volunteers |
| Liu [ | 2014 | China | Chinese | PCR-RFLP | 180:116/127:193 | 67.52 ± 10.29/66.34 ± 11.07 | 12 | 296/391 | 181/278 | 96/99 | 19/14 | 0.650 | volunteers |
| Jeon [ | 2013 | South Korea | Korean | Taqman | 336:342/244:309 | 64.16 ± 11.90/63.14 ± 10.19 | 12 | 678/553 | 460/365 | 195/170 | 23/18 | 0.589 | IS-free patients |
| Huang [ | 2015 | China | Chinese | Taqman | 327:204/327:204 | 63 (54, 70)/61 (54, 68) | 13 | 531/531 | 398/403 | 133/128 | 0/0 | 0.106 | volunteers |
HWE: Hardy-Weinberg equilibrium; PCR-RFLP: polymerase chain reaction-Restriction fragment length polymorphism; PCR-LDR: polymerase chain reaction-ligation detection reaction. The HWE of the control group polymorphism was evaluated by the χ2-test.
Summary effect estimate ORs and 95% CIs of the association between miR-146a (rs2910164), miR-149 (rs2292832), miR-196a2 (rs11614913), miR-499 (rs3746444) and ischemic stroke (IS).
| CC | Overall | 4 | 0.85 (0.57,1.28) | 0.44 | 76 | TT | Overall | 2 | 0.70 (0.52, 0.94) | 0.02 | 9 |
| Small size | 2 | 1.24 (0.91, 1.70) | 0.18 | 0 | Small size | 1 | 0.57 (0.36, 0.92) | 0.02 | N.A | ||
| Large size | 2 | 0.61 (0.47, 0.79) | 0.0002 | 0 | Large size | 1 | 0.80 (0.54, 1.17) | 0.25 | N.A | ||
| CC | Overall | 4 | 0.92 (0.80,1.06) | 0.27 | 0 | TT | Overall | 2 | 0.91 (0.75, 1.10) | 0.32 | 0 |
| Small size | 2 | 1.05 (0.83, 1.32) | 0.69 | 10 | Small size | 1 | 0.93 (0.68, 1.27) | 0.66 | N.A | ||
| Large size | 2 | 0.85 (0.71, 1.02) | 0.09 | 0 | Large size | 1 | 0.90 (0.71, 1.14) | 0.37 | N.A | ||
| CC | Overall | 4 | 0.89 (0.78, 1.02) | 0.10 | 54 | TT | Overall | 2 | 0.86 (0.72, 1.03) | 0.11 | 0 |
| Small size | 2 | 1.10 (0.88, 1.37) | 0.41 | 17 | Small size | 1 | 0.84 (0.62, 1.13) | 0.24 | 81 | ||
| Large size | 2 | 0.79 (0.67, 0.94) | 0.007 | 0 | Large size | 1 | 0.88 (0.70, 1.10) | 0.25 | N.A | ||
| C | Overall | 4 | 0.93 (0.77, 1.12) | 0.45 | 74 | T | Overall | 2 | 0.86 (0.75, 0.98) | 0.02 | 0 |
| Small size | 2 | 1.10 (0.95, 1.28) | 0.20 | 0 | Small size | 1 | 0.80 (0.65, 1.00) | 0.05 | N.A | ||
| Large size | 2 | 0.80 [0.71, 0.90) | 0.0003 | 0 | Large size | 1 | 0.89 [0.75, 1.06) | 0.20 | N.A | ||
| TT | Overall | 4 | 1.07 [0.89, 1.30) | 0.46 | 0 | AA | Overall | 3 | 0.70 [0.35, 1.42) | 0.33 | 54 |
| Small size | 2 | 1.13 [0.83, 1.55) | 0.44 | 0 | Small size | 1 | 0.48 [0.23, 0.98) | 0.04 | N.A | ||
| Large size | 2 | 1.04 [0.78, 1.39) | 0.77 | 31 | Large size | 2 | 0.99 [0.52, 1.86) | 0.97 | N.A | ||
| TT | Overall | 4 | 1.00 [0.86, 1.17) | 0.95 | 0 | AA | Overall | 3 | 0.87 [0.54, 1.41) | 0.57 | 81 |
| Small size | 2 | 0.95 [0.74, 1.22) | 0.69 | 17 | Small size | 1 | 0.67 [0.48, 0.94) | 0.02 | N.A | ||
| Large size | 2 | 1.04 [0.86, 1.26) | 0.70 | 0 | Large size | 2 | 1.03 [0.86, 1.24) | 0.75 | 0 | ||
| TT | Overall | 4 | 1.02 (0.89, 1.18) | 0.75 | 0 | AA | Overall | 3 | 0.84 (0.50, 1.42) | 0.52 | 85 |
| Small size | 2 | 1.00 (0.78, 1.26) | 0.97 | 0 | Small size | 1 | 0.64 (0.46, 0.88) | 0.006 | N.A | ||
| Large size | 2 | 1.04 (0.87, 1.25) | 0.67 | 0 | Large size | 2 | 1.03 (0.86, 1.23) | 0.77 | 0 | ||
| T | Overall | 4 | 1.03 (0.94, 1.13) | 0.48 | 0 | A | Overall | 3 | 0.84 (0.53, 1.34) | 0.47 | 86 |
| Small size | 2 | 1.05 (0.91, 1.22) | 0.50 | 0 | Small size | 1 | 0.66 (0.51, 0.87) | 0.003 | N.A | ||
| Large size | 2 | 1.02 (0.89, 1.17) | 0.75 | 26 | Large size | 2 | 1.02 (0.87, 1.20) | 0.82 | 0 | ||
The summary effect estimate ORs and CIs was detected by the Z-test. p < 0.05 was considered to be statistically significant. Groups with total samples less than 1000 were treated as small or as large. The Q-statistic was used to test for homogeneity, and the I2 was used to assess the degree of heterogeneity. When I2 > 50%, the random-effects model (the DerSimonian and Laird method) was used for the meta-analysis. Otherwise, the fixed-effect model using the Mantel-Haenszel method was used. N.A: not applicable.
Figure 2Forest plots of the odds ratio for the association between microRNA-146a rs2910164 and risks of IS. The summary effect estimate was detected by the Z-test. p < 0.05 was considered to be statistically significant. The Q-statistic was used to test for homogeneity, and the I2 was used to assess the degree of heterogeneity. The random-effects model was used for the meta-analysis when I2 > 25%. Otherwise, the fixed-effect model was used.
Figure 3Forest plots of the odds ratio for the association between microRNA-149 rs2292832 and risks of IS. The summary effect estimate was detected by the Z-test. p < 0.05 was considered to be statistically significant. The Q-statistic was used to test for homogeneity, and the I2 was used to assess the degree of heterogeneity. The random-effects model was used for the meta-analysis when I2 > 25%. Otherwise, the fixed-effect model was used.
Figure 4Forest plots of the odds ratio for the association between microRNA-196a2 rs711614913 and risks of IS. The summary effect estimate was detected by the Z-test. p < 0.05 was considered to be statistically significant. The Q-statistic was used to test for homogeneity, and the I2 was used to assess the degree of heterogeneity. The random-effects model was used for the meta-analysis when I2 > 25%. Otherwise, the fixed-effect model was used.
Figure 5Forest plots of the odds ratio for the association between microRNA-499 rs3746444 and risks of IS. The summary effect estimate was detected by the Z-test. p < 0.05 was considered to be statistically significant. The Q-statistic was used to test for homogeneity, and the I2 was used to assess the degree of heterogeneity. The random-effects model was used for the meta-analysis when I2 > 25%. Otherwise, the fixed-effect model was used.
Egger’s linear regression test for funnel plot asymmetries.
| Genetic Models | Genetic Models | ||||
|---|---|---|---|---|---|
| MiR-146 | CC | 0.191 | MiR-149 | TT | 0.918 |
| CC | 0.420 | TT | 0.547 | ||
| CC | 0.276 | TT | 0.684 | ||
| C | 0.110 | T | 0.758 | ||
| MiR-196a2 | TT | 0.569 | MiR-499 | AA | Not estimated |
| TT | 0.413 | AA | 0.392 | ||
| TT | 0.630 | AA | 0.185 | ||
| T | 0.563 | A | 0.405 |