Literature DB >> 26684730

The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.).

Solenn Mordret1,2, Sarah Romac1,2, Nicolas Henry1,2, Sébastien Colin1,2, Margaux Carmichael1,2, Cédric Berney1,2, Stéphane Audic1,2, Daniel J Richter1,2, Xavier Pochon3,4, Colomban de Vargas1,2, Johan Decelle1,2.   

Abstract

Symbiotic partnerships between heterotrophic hosts and intracellular microalgae are common in tropical and subtropical oligotrophic waters of benthic and pelagic marine habitats. The iconic example is the photosynthetic dinoflagellate genus Symbiodinium that establishes mutualistic symbioses with a wide diversity of benthic hosts, sustaining highly biodiverse reef ecosystems worldwide. Paradoxically, although various species of photosynthetic dinoflagellates are prevalent eukaryotic symbionts in pelagic waters, Symbiodinium has not yet been reported in symbiosis within oceanic plankton, despite its high propensity for the symbiotic lifestyle. Here we report a new pelagic photosymbiosis between a calcifying ciliate host and the microalga Symbiodinium in surface ocean waters. Confocal and scanning electron microscopy, together with an 18S rDNA-based phylogeny, showed that the host is a new ciliate species closely related to Tiarina fusus (Colepidae). Phylogenetic analyses of the endosymbionts based on the 28S rDNA gene revealed multiple novel closely related Symbiodinium clade A genotypes. A haplotype network using the high-resolution internal transcribed spacer-2 marker showed that these genotypes form eight divergent, biogeographically structured, subclade types that do not seem to associate with any benthic hosts. Ecological analyses using the Tara Oceans metabarcoding data set (V9 region of the 18S rDNA) and contextual oceanographic parameters showed a global distribution of the symbiotic partnership in nutrient-poor surface waters. The discovery of the symbiotic life of Symbiodinium in the open ocean provides new insights into the ecology and evolution of this pivotal microalga and raises new hypotheses about coastal pelagic connectivity.

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Year:  2015        PMID: 26684730      PMCID: PMC5029185          DOI: 10.1038/ismej.2015.211

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  44 in total

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4.  Coral bleaching: thermal adaptation in reef coral symbionts.

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5.  GeoSymbio: a hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses.

Authors:  Erik C Franklin; Michael Stat; Xavier Pochon; Hollie M Putnam; Ruth D Gates
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Authors:  Xavier Pochon; Ruth D Gates
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7.  A microworld in Triassic amber.

Authors:  Alexander R Schmidt; Eugenio Ragazzi; Olimpia Coppellotti; Guido Roghi
Journal:  Nature       Date:  2006-12-14       Impact factor: 49.962

8.  Taxonomic descriptions of three marine colepid ciliates, Nolandia sinica spec. nov., Apocoleps caoi spec. nov. and Tiarina fusa (Claparede & Lachmann, 1858) Bergh, 1881 (Ciliophora, Prorodontida).

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Journal:  Int J Syst Evol Microbiol       Date:  2011-04-22       Impact factor: 2.747

9.  Identifying and characterizing alternative molecular markers for the symbiotic and free-living dinoflagellate genus Symbiodinium.

Authors:  Xavier Pochon; Hollie M Putnam; Fabien Burki; Ruth D Gates
Journal:  PLoS One       Date:  2012-01-04       Impact factor: 3.240

10.  GenBank.

Authors:  Dennis A Benson; Karen Clark; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; Eric W Sayers
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  8 in total

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Authors:  David A Caron
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-01       Impact factor: 11.205

2.  Glucose-Induced Trophic Shift in an Endosymbiont Dinoflagellate with Physiological and Molecular Consequences.

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Journal:  Plant Physiol       Date:  2017-12-07       Impact factor: 8.340

Review 3.  Tara Oceans: towards global ocean ecosystems biology.

Authors:  Shinichi Sunagawa; Silvia G Acinas; Peer Bork; Chris Bowler; Damien Eveillard; Gabriel Gorsky; Lionel Guidi; Daniele Iudicone; Eric Karsenti; Fabien Lombard; Hiroyuki Ogata; Stephane Pesant; Matthew B Sullivan; Patrick Wincker; Colomban de Vargas
Journal:  Nat Rev Microbiol       Date:  2020-05-12       Impact factor: 60.633

4.  A de novo approach to disentangle partner identity and function in holobiont systems.

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Journal:  Microbiome       Date:  2018-06-09       Impact factor: 14.650

5.  An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region.

Authors:  Benjamin C C Hume; Maren Ziegler; Julie Poulain; Xavier Pochon; Sarah Romac; Emilie Boissin; Colomban de Vargas; Serge Planes; Patrick Wincker; Christian R Voolstra
Journal:  PeerJ       Date:  2018-05-23       Impact factor: 2.984

6.  Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans.

Authors:  Anthony Duncan; Kerrie Barry; Chris Daum; Emiley Eloe-Fadrosh; Simon Roux; Katrin Schmidt; Susannah G Tringe; Klaus U Valentin; Neha Varghese; Asaf Salamov; Igor V Grigoriev; Richard M Leggett; Vincent Moulton; Thomas Mock
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7.  Taxonomy and Molecular Phylogeny of Two New Species of Prostomatean Ciliates With Establishment of Foissnerophrys gen. n. (Alveolata, Ciliophora).

Authors:  Limin Jiang; Wenbao Zhuang; Hamed A El-Serehy; Saleh A Al-Farraj; Alan Warren; Xiaozhong Hu
Journal:  Front Microbiol       Date:  2021-06-18       Impact factor: 5.640

8.  An integrative approach sheds new light onto the systematics and ecology of the widespread ciliate genus Coleps (Ciliophora, Prostomatea).

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  8 in total

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