Literature DB >> 26681370

The complete mitogenome of Amolops loloensis and related phylogenetic relationship among Ranidae.

Rui Xue1, Jiabin Liu1, Jiaojiao Yu1, Jiandong Yang1.   

Abstract

Rufous-spotted Torrent Frog (Amolops loloensis) is a vulnerable species, which belongs to the family Ranidae and is distributed in high-gradient streams of Sichuan and Yunnan, China. In this study, we first determined the complete mitochondrial DNA sequence of A. loloensis (GenBank accession no. KT750963). The mitogenome sequence of A. loloensis was 18 926 bp in size. It contained 13 protein-coding genes (PCGs), two rRNAs, 22 tRNAs, and a D-loop region. Amolops loloensis shared the same gene arrangement pattern with A. mantzorum. The OL structures of A. loloensis and A. mantzorum were both located at the upstream of trnA-trnN, while the OL structures of A. ricketti and A. wuyiensis were both located at the downstream of trnA-trnN. It is of great interest to discuss the gene rearrangement mechanisms in the following study.

Entities:  

Keywords:  Amolops loloensis; Ranidae; W-OL-ANCY; mitochondrial genome; phylogeny

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Year:  2015        PMID: 26681370     DOI: 10.3109/19401736.2015.1101589

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  2 in total

1.  Next-generation sequencing of mixed genomic DNA allows efficient assembly of rearranged mitochondrial genomes in Amolops chunganensis and Quasipaa boulengeri.

Authors:  Siqi Yuan; Yun Xia; Yuchi Zheng; Xiaomao Zeng
Journal:  PeerJ       Date:  2016-12-15       Impact factor: 2.984

2.  The complete mitogenome of the granular torrent frog, Amolops granulosus (Anura: Ranidae).

Authors:  An Huang; Hongdi Luo; Sangdawa Luo; Haijun Li; Qingyong Ni; Yongfang Yao; Huailiang Xu; Bo Zeng; Ying Li; Zhimin Wei; Mingwang Zhang
Journal:  Mitochondrial DNA B Resour       Date:  2019-07-19       Impact factor: 0.658

  2 in total

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