Literature DB >> 26679422

Three easy pieces.

Arne Schön1, Ernesto Freire2.   

Abstract

BACKGROUND: Differential scanning calorimetry is a powerful method that provides a complete thermodynamic characterization of the stability of a protein as a function of temperature. There are, however, circumstances that preclude a complete analysis of DSC data. The most common ones are irreversible denaturation transitions or transitions that take place at temperatures that are beyond the temperature limit of the instrument. Even for a protein that undergoes reversible thermal denaturation, the extrapolation of the thermodynamic data to lower temperatures, usually 25°C, may become unreliable due to difficulties in the determination of ΔCp.
METHODS: The combination of differential scanning calorimetry and isothermal chemical denaturation allows reliable thermodynamic analysis of protein stability under less than ideal conditions. RESULTS AND
CONCLUSIONS: This paper demonstrates how DSC can be used in combination with chemical denaturation to address three different scenarios: 1) estimation of an accurate ΔCp value for a reversible denaturation using as a test system the envelope HIV-1 glycoprotein gp120; 2) determination of the Gibbs energy of stability in the region in which thermal denaturation is irreversible using HEW lysozyme at different pH values; and, 3) determination of Gibbs energy of stability for a thermostable protein, thermolysin.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chemical denaturation; DSC; HEW lysozyme; HIV-1 gp120; ICD; Thermolysin

Mesh:

Substances:

Year:  2015        PMID: 26679422      PMCID: PMC4799745          DOI: 10.1016/j.bbagen.2015.12.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  21 in total

1.  Protein Structure and the Energetics of Protein Stability.

Authors:  Andrew D. Robertson; Kenneth P. Murphy
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

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Journal:  Biophys Chem       Date:  1976-01       Impact factor: 2.352

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Journal:  Nat Struct Biol       Date:  1998-08

4.  Differential scanning calorimetry of the irreversible thermal denaturation of thermolysin.

Authors:  J M Sánchez-Ruiz; J L López-Lacomba; M Cortijo; P L Mateo
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

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Authors:  P L Privalov; N N Khechinashvili; B P Atanasov
Journal:  Biopolymers       Date:  1971-10       Impact factor: 2.505

7.  Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding.

Authors:  J K Myers; C N Pace; J M Scholtz
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

Review 8.  Interactions of HIV-1 proteins gp120 and Nef with cellular partners define a novel allosteric paradigm.

Authors:  Stephanie A Leavitt; Arne SchOn; Jeffrey C Klein; Uma Manjappara; Irwin M Chaiken; Ernesto Freire
Journal:  Curr Protein Pept Sci       Date:  2004-02       Impact factor: 3.272

9.  Determining stability of proteins from guanidinium chloride transition curves.

Authors:  F Ahmad; S Yadav; S Taneja
Journal:  Biochem J       Date:  1992-10-15       Impact factor: 3.857

10.  The high-resolution NMR structure of the R21A Spc-SH3:P41 complex: understanding the determinants of binding affinity by comparison with Abl-SH3.

Authors:  Salvador Casares; Eiso Ab; Henk Eshuis; Obdulio Lopez-Mayorga; Nico A J van Nuland; Francisco Conejero-Lara
Journal:  BMC Struct Biol       Date:  2007-04-02
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  2 in total

1.  Facile measurement of protein stability and folding kinetics using a nano differential scanning fluorimeter.

Authors:  Gopinath Chattopadhyay; Raghavan Varadarajan
Journal:  Protein Sci       Date:  2019-04-29       Impact factor: 6.725

2.  Temperature stability of proteins: Analysis of irreversible denaturation using isothermal calorimetry.

Authors:  Arne Schön; Benjamin R Clarkson; Maria Jaime; Ernesto Freire
Journal:  Proteins       Date:  2017-08-08
  2 in total

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