Literature DB >> 26678709

Microfluidic Diffusion Analysis of the Sizes and Interactions of Proteins under Native Solution Conditions.

Paolo Arosio1, Thomas Müller1,2, Luke Rajah1, Emma V Yates1, Francesco A Aprile1, Yingbo Zhang1, Samuel I A Cohen1, Duncan A White1, Therese W Herling1, Erwin J De Genst1, Sara Linse3, Michele Vendruscolo1, Christopher M Dobson1, Tuomas P J Knowles1.   

Abstract

Characterizing the sizes and interactions of macromolecules under native conditions is a challenging problem in many areas of molecular sciences, which fundamentally arises from the polydisperse nature of biomolecular mixtures. Here, we describe a microfluidic platform for diffusional sizing based on monitoring micron-scale mass transport simultaneously in space and time. We show that the global analysis of such combined space-time data enables the hydrodynamic radii of individual species within mixtures to be determined directly by deconvoluting average signals into the contributions from the individual species. We demonstrate that the ability to perform rapid noninvasive sizing allows this method to be used to characterize interactions between biomolecules under native conditions. We illustrate the potential of the technique by implementing a single-step quantitative immunoassay that operates on a time scale of seconds and detects specific interactions between biomolecules within complex mixtures.

Keywords:  diffusion; immunoassay; interactions; polydispersity; proteins; size distribution

Mesh:

Substances:

Year:  2015        PMID: 26678709     DOI: 10.1021/acsnano.5b04713

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  21 in total

1.  Mechanism of biosurfactant adsorption to oil/water interfaces from millisecond scale tensiometry measurements.

Authors:  Lingling Kong; Kadi Liis Saar; Raphael Jacquat; Liu Hong; Aviad Levin; Hongze Gang; Ruqiang Ye; Bozhong Mu; Tuomas P J Knowles
Journal:  Interface Focus       Date:  2017-10-20       Impact factor: 3.906

2.  Kinetic fingerprints differentiate the mechanisms of action of anti-Aβ antibodies.

Authors:  Sara Linse; Tom Scheidt; Katja Bernfur; Michele Vendruscolo; Christopher M Dobson; Samuel I A Cohen; Eimantas Sileikis; Martin Lundqvist; Fang Qian; Tiernan O'Malley; Thierry Bussiere; Paul H Weinreb; Catherine K Xu; Georg Meisl; Sean R A Devenish; Tuomas P J Knowles; Oskar Hansson
Journal:  Nat Struct Mol Biol       Date:  2020-09-28       Impact factor: 15.369

3.  Rapid Structural, Kinetic, and Immunochemical Analysis of Alpha-Synuclein Oligomers in Solution.

Authors:  William E Arter; Catherine K Xu; Marta Castellana-Cruz; Therese W Herling; Georg Krainer; Kadi L Saar; Janet R Kumita; Christopher M Dobson; Tuomas P J Knowles
Journal:  Nano Lett       Date:  2020-10-20       Impact factor: 11.189

4.  Scaling analysis reveals the mechanism and rates of prion replication in vivo.

Authors:  Georg Meisl; Timothy Kurt; Itzel Condado-Morales; Cyrus Bett; Silvia Sorce; Mario Nuvolone; Thomas C T Michaels; Daniel Heinzer; Merve Avar; Samuel I A Cohen; Simone Hornemann; Adriano Aguzzi; Christopher M Dobson; Christina J Sigurdson; Tuomas P J Knowles
Journal:  Nat Struct Mol Biol       Date:  2021-03-25       Impact factor: 15.369

5.  Measuring Self-Association of Antibody Lead Candidates with Dynamic Light Scattering.

Authors:  Fabian Dingfelder; Anette Henriksen; Per-Olof Wahlund; Paolo Arosio; Nikolai Lorenzen
Journal:  Methods Mol Biol       Date:  2022

6.  Assessment of Therapeutic Antibody Developability by Combinations of In Vitro and In Silico Methods.

Authors:  Adriana-Michelle Wolf Pérez; Nikolai Lorenzen; Michele Vendruscolo; Pietro Sormanni
Journal:  Methods Mol Biol       Date:  2022

7.  β-Synuclein suppresses both the initiation and amplification steps of α-synuclein aggregation via competitive binding to surfaces.

Authors:  James W P Brown; Alexander K Buell; Thomas C T Michaels; Georg Meisl; Jacqueline Carozza; Patrick Flagmeier; Michele Vendruscolo; Tuomas P J Knowles; Christopher M Dobson; Céline Galvagnion
Journal:  Sci Rep       Date:  2016-11-03       Impact factor: 4.379

8.  On-chip measurements of protein unfolding from direct observations of micron-scale diffusion.

Authors:  Yuewen Zhang; Emma V Yates; Liu Hong; Kadi L Saar; Georg Meisl; Christopher M Dobson; Tuomas P J Knowles
Journal:  Chem Sci       Date:  2018-02-09       Impact factor: 9.825

9.  Rational design of a conformation-specific antibody for the quantification of Aβ oligomers.

Authors:  Francesco A Aprile; Pietro Sormanni; Marina Podpolny; Shianne Chhangur; Lisa-Maria Needham; Francesco S Ruggeri; Michele Perni; Ryan Limbocker; Gabriella T Heller; Tomas Sneideris; Tom Scheidt; Benedetta Mannini; Johnny Habchi; Steven F Lee; Patricia C Salinas; Tuomas P J Knowles; Christopher M Dobson; Michele Vendruscolo
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-03       Impact factor: 11.205

10.  Cooperative Assembly of Hsp70 Subdomain Clusters.

Authors:  Maya A Wright; Francesco A Aprile; Mathias M J Bellaiche; Thomas C T Michaels; Thomas Müller; Paolo Arosio; Michele Vendruscolo; Christopher M Dobson; Tuomas P J Knowles
Journal:  Biochemistry       Date:  2018-05-29       Impact factor: 3.162

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