Literature DB >> 26678299

Individualized Map of White Matter Pathways: Connectivity-Based Paradigm for Neurosurgical Planning.

Birkan Tunç1, Madhura Ingalhalikar, Drew Parker, Jérémy Lecoeur, Nickpreet Singh, Ronald L Wolf, Luke Macyszyn, Steven Brem, Ragini Verma.   

Abstract

BACKGROUND: Advances in white matter tractography enhance neurosurgical planning and glioma resection, but white matter tractography is limited by biological variables such as edema, mass effect, and tract infiltration or selection biases related to regions of interest or fractional anisotropy values.
OBJECTIVE: To provide an automated tract identification paradigm that corrects for artifacts created by tumor edema and infiltration and provides a consistent, accurate method of fiber bundle identification.
METHODS: An automated tract identification paradigm was developed and evaluated for glioma surgery. A fiber bundle atlas was generated from 6 healthy participants. Fibers of a test set (including 3 healthy participants and 10 patients with brain tumors) were clustered adaptively with this atlas. Reliability of the identified tracts in both groups was assessed by comparison with 2 experts with the Cohen κ used to quantify concurrence. We evaluated 6 major fiber bundles: cingulum bundle, fornix, uncinate fasciculus, arcuate fasciculus, inferior fronto-occipital fasciculus, and inferior longitudinal fasciculus, the last 3 tracts mediating language function.
RESULTS: The automated paradigm demonstrated a reliable and practical method to identify white mater tracts, despite mass effect, edema, and tract infiltration. When the tumor demonstrated significant mass effect or shift, the automated approach was useful for providing an initialization to guide the expert with identification of the specific tract of interest.
CONCLUSION: We report a reliable paradigm for the automated identification of white matter pathways in patients with gliomas. This approach should enhance the neurosurgical objective of maximal safe resections. ABBREVIATIONS: AF, arcuate fasciculusDTI, diffusion tensor imagingIFOF, inferior fronto-occipital fasciculusILF, inferior longitudinal fasciculusROI, region of interestWM, white matter.

Entities:  

Mesh:

Year:  2016        PMID: 26678299      PMCID: PMC4911597          DOI: 10.1227/NEU.0000000000001183

Source DB:  PubMed          Journal:  Neurosurgery        ISSN: 0148-396X            Impact factor:   4.654


  48 in total

1.  Fiber tracking with distinct software tools results in a clear diversity in anatomical fiber tract portrayal.

Authors:  U Bürgel; B Mädler; C R Honey; A Thron; J Gilsbach; V A Coenen
Journal:  Cent Eur Neurosurg       Date:  2009-02-03

2.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

3.  Feature-based groupwise registration by hierarchical anatomical correspondence detection.

Authors:  Guorong Wu; Qian Wang; Hongjun Jia; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2011-03-09       Impact factor: 5.038

4.  Automatic whole brain tract-based analysis using predefined tracts in a diffusion spectrum imaging template and an accurate registration strategy.

Authors:  Yu-Jen Chen; Yu-Chun Lo; Yung-Chin Hsu; Chun-Chieh Fan; Tzung-Jeng Hwang; Chih-Min Liu; Yi-Ling Chien; Ming H Hsieh; Chen-Chung Liu; Hai-Gwo Hwu; Wen-Yih Isaac Tseng
Journal:  Hum Brain Mapp       Date:  2015-06-05       Impact factor: 5.038

5.  Quantifying accuracy and precision of diffusion MR tractography of the corticospinal tract in brain tumors.

Authors:  Maria Luisa Mandelli; Mitchel S Berger; Monica Bucci; Jeffrey I Berman; Bagrat Amirbekian; Roland G Henry
Journal:  J Neurosurg       Date:  2014-06-06       Impact factor: 5.115

6.  Automated tract extraction via atlas based Adaptive Clustering.

Authors:  Birkan Tunç; William A Parker; Madhura Ingalhalikar; Ragini Verma
Journal:  Neuroimage       Date:  2014-08-15       Impact factor: 6.556

7.  Unsupervised white matter fiber clustering and tract probability map generation: applications of a Gaussian process framework for white matter fibers.

Authors:  D Wassermann; L Bloy; E Kanterakis; R Verma; R Deriche
Journal:  Neuroimage       Date:  2010-01-14       Impact factor: 6.556

8.  Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography.

Authors:  Aristotle N Voineskos; Lauren J O'Donnell; Nancy J Lobaugh; Doug Markant; Stephanie H Ameis; Marc Niethammer; Benoit H Mulsant; Bruce G Pollock; James L Kennedy; Carl Fredrik Westin; Martha E Shenton
Journal:  Neuroimage       Date:  2008-12-29       Impact factor: 6.556

Review 9.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

10.  Preservation of neurocognitive function and local control of 1 to 3 brain metastases treated with surgery and carmustine wafers.

Authors:  Steven Brem; Christina A Meyers; Gary Palmer; Margaret Booth-Jones; Surbhi Jain; Matthew G Ewend
Journal:  Cancer       Date:  2013-08-23       Impact factor: 6.860

View more
  11 in total

1.  Deep white matter analysis: fast, consistent tractography segmentation across populations and dMRI acquisitions.

Authors:  Fan Zhang; Nico Hoffmann; Suheyla Cetin Karayumak; Yogesh Rathi; Alexandra J Golby; Lauren J O'Donnell
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

2.  Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma.

Authors:  Saima Rathore; Spyridon Bakas; Sarthak Pati; Hamed Akbari; Ratheesh Kalarot; Patmaa Sridharan; Martin Rozycki; Mark Bergman; Birkan Tunc; Ragini Verma; Michel Bilello; Christos Davatzikos
Journal:  Brainlesion       Date:  2018-02-17

3.  Deep white matter analysis (DeepWMA): Fast and consistent tractography segmentation.

Authors:  Fan Zhang; Suheyla Cetin Karayumak; Nico Hoffmann; Yogesh Rathi; Alexandra J Golby; Lauren J O'Donnell
Journal:  Med Image Anal       Date:  2020-06-24       Impact factor: 8.545

4.  Tumor location-based classification of surgery-related language impairments in patients with glioma.

Authors:  Shengyu Fang; Yuchao Liang; Lianwang Li; Lei Wang; Xing Fan; Yinyan Wang; Tao Jiang
Journal:  J Neurooncol       Date:  2021-10-01       Impact factor: 4.130

5.  The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview.

Authors:  Sarthak Pati; Ashish Singh; Saima Rathore; Aimilia Gastounioti; Mark Bergman; Phuc Ngo; Sung Min Ha; Dimitrios Bounias; James Minock; Grayson Murphy; Hongming Li; Amit Bhattarai; Adam Wolf; Patmaa Sridaran; Ratheesh Kalarot; Hamed Akbari; Aristeidis Sotiras; Siddhesh P Thakur; Ragini Verma; Russell T Shinohara; Paul Yushkevich; Yong Fan; Despina Kontos; Christos Davatzikos; Spyridon Bakas
Journal:  Brainlesion       Date:  2020-05-19

6.  Cancer imaging phenomics toolkit: quantitative imaging analytics for precision diagnostics and predictive modeling of clinical outcome.

Authors:  Christos Davatzikos; Saima Rathore; Spyridon Bakas; Sarthak Pati; Mark Bergman; Ratheesh Kalarot; Patmaa Sridharan; Aimilia Gastounioti; Nariman Jahani; Eric Cohen; Hamed Akbari; Birkan Tunc; Jimit Doshi; Drew Parker; Michael Hsieh; Aristeidis Sotiras; Hongming Li; Yangming Ou; Robert K Doot; Michel Bilello; Yong Fan; Russell T Shinohara; Paul Yushkevich; Ragini Verma; Despina Kontos
Journal:  J Med Imaging (Bellingham)       Date:  2018-01-11

7.  Automated white matter fiber tract identification in patients with brain tumors.

Authors:  Lauren J O'Donnell; Yannick Suter; Laura Rigolo; Pegah Kahali; Fan Zhang; Isaiah Norton; Angela Albi; Olutayo Olubiyi; Antonio Meola; Walid I Essayed; Prashin Unadkat; Pelin Aksit Ciris; William M Wells; Yogesh Rathi; Carl-Fredrik Westin; Alexandra J Golby
Journal:  Neuroimage Clin       Date:  2016-11-25       Impact factor: 4.881

Review 8.  White matter tractography for neurosurgical planning: A topography-based review of the current state of the art.

Authors:  Walid I Essayed; Fan Zhang; Prashin Unadkat; G Rees Cosgrove; Alexandra J Golby; Lauren J O'Donnell
Journal:  Neuroimage Clin       Date:  2017-06-15       Impact factor: 4.881

9.  Free water modeling of peritumoral edema using multi-fiber tractography: Application to tracking the arcuate fasciculus for neurosurgical planning.

Authors:  Shun Gong; Fan Zhang; Isaiah Norton; Walid I Essayed; Prashin Unadkat; Laura Rigolo; Ofer Pasternak; Yogesh Rathi; Lijun Hou; Alexandra J Golby; Lauren J O'Donnell
Journal:  PLoS One       Date:  2018-05-10       Impact factor: 3.240

10.  Freewater estimatoR using iNtErpolated iniTialization (FERNET): Characterizing peritumoral edema using clinically feasible diffusion MRI data.

Authors:  Drew Parker; Abdol Aziz Ould Ismail; Ronald Wolf; Steven Brem; Simon Alexander; Wes Hodges; Ofer Pasternak; Emmanuel Caruyer; Ragini Verma
Journal:  PLoS One       Date:  2020-05-29       Impact factor: 3.752

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.