Literature DB >> 26674972

On characterizing population commonalities and subject variations in brain networks.

Yasser Ghanbari1, Luke Bloy2, Birkan Tunc3, Varsha Shankar3, Timothy P L Roberts4, J Christopher Edgar4, Robert T Schultz4, Ragini Verma3.   

Abstract

Brain networks based on resting state connectivity as well as inter-regional anatomical pathways obtained using diffusion imaging have provided insight into pathology and development. Such work has underscored the need for methods that can extract sub-networks that can accurately capture the connectivity patterns of the underlying population while simultaneously describing the variation of sub-networks at the subject level. We have designed a multi-layer graph clustering method that extracts clusters of nodes, called 'network hubs', which display higher levels of connectivity within the cluster than to the rest of the brain. The method determines an atlas of network hubs that describes the population, as well as weights that characterize subject-wise variation in terms of within- and between-hub connectivity. This lowers the dimensionality of brain networks, thereby providing a representation amenable to statistical analyses. The applicability of the proposed technique is demonstrated by extracting an atlas of network hubs for a population of typically developing controls (TDCs) as well as children with autism spectrum disorder (ASD), and using the structural and functional networks of a population to determine the subject-level variation of these hubs and their inter-connectivity. These hubs are then used to compare ASD and TDCs. Our method is generalizable to any population whose connectivity (structural or functional) can be captured via non-negative network graphs.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Autism spectrum disorder; Connectivity analysis; Multi-layer graph clustering; Non-negative matrix factorization; Population difference

Mesh:

Year:  2015        PMID: 26674972      PMCID: PMC4887425          DOI: 10.1016/j.media.2015.10.009

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  80 in total

Review 1.  Exploring the brain network: a review on resting-state fMRI functional connectivity.

Authors:  Martijn P van den Heuvel; Hilleke E Hulshoff Pol
Journal:  Eur Neuropsychopharmacol       Date:  2010-05-14       Impact factor: 4.600

2.  Electrophysiological signatures of resting state networks in the human brain.

Authors:  D Mantini; M G Perrucci; C Del Gratta; G L Romani; M Corbetta
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-01       Impact factor: 11.205

3.  Mining the posterior cingulate: segregation between memory and pain components.

Authors:  Finn Arup Nielsen; Daniela Balslev; Lars Kai Hansen
Journal:  Neuroimage       Date:  2005-09       Impact factor: 6.556

4.  A Bayesian approach for stochastic white matter tractography.

Authors:  Ola Friman; Gunnar Farnebäck; Carl-Fredrik Westin
Journal:  IEEE Trans Med Imaging       Date:  2006-08       Impact factor: 10.048

Review 5.  Disrupted cortical connectivity theory as an explanatory model for autism spectrum disorders.

Authors:  Rajesh K Kana; Lauren E Libero; Marie S Moore
Journal:  Phys Life Rev       Date:  2011-10-13       Impact factor: 11.025

6.  A functional network estimation method of resting-state fMRI using a hierarchical Markov random field.

Authors:  Wei Liu; Suyash P Awate; Jeffrey S Anderson; P Thomas Fletcher
Journal:  Neuroimage       Date:  2014-06-17       Impact factor: 6.556

7.  Resting-state alpha in autism spectrum disorder and alpha associations with thalamic volume.

Authors:  J Christopher Edgar; Kory Heiken; Yu-Han Chen; John D Herrington; Vivian Chow; Song Liu; Luke Bloy; Mingxiong Huang; Juhi Pandey; Katelyn M Cannon; Saba Qasmieh; Susan E Levy; Robert T Schultz; Timothy P L Roberts
Journal:  J Autism Dev Disord       Date:  2015-03

8.  Functional and anatomical cortical underconnectivity in autism: evidence from an FMRI study of an executive function task and corpus callosum morphometry.

Authors:  Marcel Adam Just; Vladimir L Cherkassky; Timothy A Keller; Rajesh K Kana; Nancy J Minshew
Journal:  Cereb Cortex       Date:  2006-06-13       Impact factor: 5.357

9.  Reward system dysfunction in autism spectrum disorders.

Authors:  Gregor Kohls; Martin Schulte-Rüther; Barbara Nehrkorn; Kristin Müller; Gereon R Fink; Inge Kamp-Becker; Beate Herpertz-Dahlmann; Robert T Schultz; Kerstin Konrad
Journal:  Soc Cogn Affect Neurosci       Date:  2012-03-13       Impact factor: 3.436

10.  Structural brain abnormalities in adolescents with autism spectrum disorder and patients with attention deficit/hyperactivity disorder.

Authors:  Sarah Brieber; Susanne Neufang; Nicole Bruning; Inge Kamp-Becker; Helmut Remschmidt; Beate Herpertz-Dahlmann; Gereon R Fink; Kerstin Konrad
Journal:  J Child Psychol Psychiatry       Date:  2007-12       Impact factor: 8.982

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