| Literature DB >> 26672076 |
Ana M Hanan-A1, Heike Vibrans2, N Ivalú Cacho3, José L Villaseñor3, Enrique Ortiz3, Vinicio A Gómez-G4.
Abstract
It is often desirable to quantify a plant's relative weediness or synanthropy, that is, the degree to which a species associates with human-caused disturbance, in order to study and understand the biology, ecology and evolution of weeds and invasive plants. Herbarium specimens are among the most accessible and verifiable sources of data on distribution and habitat. However, the habitat distribution of species may not be reflected accurately by herbarium specimen data, due to well-known biases in plant collection. Here, we assess how well herbarium specimens reflect species' weediness, when compared with direct field surveys. We used five species of Melampodium (Asteraceae) and classified their degree of weediness with a modification of Nuorteva's synanthropy index, based on herbarium specimens. We then modelled the distribution of our focal species in Mexico using MaxEnt and identified a polygon of ∼3000 km(2) in the state of Nayarit, Mexico, where there was a high probability of finding all five species. Systematic field searches in the target area documented all visible populations of four species along major and minor roads. Then we, again, classified their degree of weediness with the synanthropy index, based now on field data, and compared. We found that herbarium data were an accurate predictor of a species' weediness relative to its congeners despite the well-documented skew of herbarium data towards natural areas, which our data reflected as well. So, herbarium data can be used to classify species' weediness relative to each other, but not in absolute terms, if the specimens were correctly identified and none of the species were subject to particular collection bias. This study is the first attempt to compare herbarium and field data on this subject and may be relevant for other types of investigations based on herbarium data. Our work also highlights the usefulness of distribution models based on herbarium specimens. Published by Oxford University Press on behalf of the Annals of Botany Company.Entities:
Keywords: Distribution modelling; MaxEnt; disturbed habitat; herbarium specimen data; ruderal plants; synanthropy; weed; weediness index
Year: 2015 PMID: 26672076 PMCID: PMC4740360 DOI: 10.1093/aobpla/plv144
Source DB: PubMed Journal: AoB Plants Impact factor: 3.276
Figure 1.Overlapping models of the potential distribution of five species of Melampodium in (A) Mexico, (B) Nayarit and (C) the surveyed area. The colours indicate the probability of finding one (dark green) to five (red) species. The symbols show the sites of the populations of the four documented species in the surveyed area. Map (D) shows the vegetation types of the surveyed area and was adapted from INEGI (2013); it also shows the roads along which the survey was conducted. The abbreviations for the vegetation types are as follows: CF, cloud forest or tropical humid mountain forest; PF, pine (Pinus) forest; PQF, pine-oak forest; QF, oak (Quercus) forest; TDF, tropical dry (or deciduous) forest; TSHF, tropical subhumid forest; SV/PQF, secondary vegetation derived from pine-oak forest; SV/QF, secondary vegetation derived from oak forest; SV/TDF, secondary vegetation derived from tropical dry forest; SV/TSDF, secondary vegetation derived from tropical semi-dry (or semi-deciduous) forest; SV/TSHF, secondary vegetation derived from tropical subhumid forest; P, induced grassland; A, agricultural land.
Number of records of the five focal species of Melampodium by habitat, obtained from the specimen and field survey data. The proportion (%) is in parentheses.
| Type of data | Species | Agrestal | Ruderal | Natural | Total |
|---|---|---|---|---|---|
| Herbarium data | 4 (5) | 43 (54) | 32 (41) | 79 | |
| 47 (17) | 118 (42) | 114 (41) | 279 | ||
| 10 (13) | 26 (33) | 42 (54) | 78 | ||
| 13 (14) | 36 (39) | 43 (47) | 92 | ||
| 0 (0) | 2 (13) | 13 (87) | 15 | ||
| Total | 74 | 225 | 244 | 543 | |
| Field data | 0 (0) | 0 (0) | 0 (0) | 0 | |
| 9 (6) | 140 (94) | 0 (0) | 149 | ||
| 0 (0) | 10 (71) | 4 (29) | 14 | ||
| 0 (0) | 7 (100) | 0 (0) | 7 | ||
| 0 (0) | 2 (67) | 1 (33) | 3 | ||
| Total | 9 | 159 | 5 | 173 |
Synanthropy index values for the studied Melampodium species using herbarium specimens and field surveys.
| Species | SI | |
|---|---|---|
| Specimen data | Field data | |
| 1.76 | 2.06 | |
| 1.67 | 2.00 | |
| 1.64 | – | |
| 1.59 | 1.71 | |
| 1.13 | 1.67 | |
Observed records and expected values (median and 95 % CI, α = 0.05, df = 999) for each species and habitat combination under randomized data. Values that fell outside the 95 % CI and are thus interpreted to be significantly different from random are highlighted in bold. Species abbreviations are as follows: Mam, Melampodium americanum; Mdi, M. divaricatum; Mmi, M. microcephalum; Mpe, M. perfoliatum; Mte, M. tepicense.
| Species | Agrestal habitat | Ruderal habitat | Natural vegetation | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Observed records | Expected median | Expected 95 % CI | Observed records | Expected median | Expected 95 % CI | Observed records | Expected median | Expected 95 % CI | |
| Mam | 11 | 10.3, 11.5 | 32.6 | 31.7, 33.5 | 35.5 | 34.6, 36.4 | |||
| Mdi | 38 | 37.5, 38.5 | 115.6 | 114.9, 116.3 | 125.4 | 124.7, 126.1 | |||
| Mmi | 10 | 11 | 9.9, 11.3 | 32.1 | 31.2, 33.0 | 35.3 | 34.2, 36.2 | ||
| Mpe | 13 | 13 | 12.0, 13.2 | 38.1 | 37.2, 39.0 | 41.3 | 40.4, 42.1 | ||
| Mte | 2 | 1.5, 2.7 | 6.1 | 5.1, 7.1 | 6.8 | 5.8, 7.8 | |||
Figure 2.Observed values (red line) and histograms of the distributions of the specimen data from agrestal, ruderal and natural habitats, after 1000 random resamplings for each species.
Figure 3.Frequency of relative rankings by species based on SI, after 100 random bootstrap resamplings with 25, 50 and 75 % of all the species records. On the x-axis, the number 1 indicates the first position in agreement with the SI of the other species, while the number 5 indicates the last position.