| Literature DB >> 26664596 |
Albert Poater1, Luigi Cavallo2.
Abstract
During a Ru-catalyzed reaction of anEntities:
Keywords: N-heterocyclic carbene; cis; density functional theory (DFT); olefin metathesis; ruthenium
Year: 2015 PMID: 26664596 PMCID: PMC4660983 DOI: 10.3762/bjoc.11.192
Source DB: PubMed Journal: Beilstein J Org Chem ISSN: 1860-5397 Impact factor: 2.883
Scheme 1Mechanism of the olefin metathesis.
Scheme 2Possible side or bottom mechanism of the insertion of the olefin.
Scheme 3Ruthenium catalysts, bottom-bound (a) or side-bound (b and c).
Scheme 4Studied systems.
Binding energy, in kcal/mol, of the first, E1, and of the second, E2, pyridine/PMe3 molecule to the naked 14e species 1–13.
| system | pyridine | PMe3 | ||||
| 20.3 | 2.5 | 22.8 | 27.3 | 5.1 | 32.4 | |
| 18.3 | 9.6 | 27.9 | 26.8 | 9.1 | 35.9 | |
| 21.0 | 7.7 | 30.7 | 25.5 | 13.2 | 38.7 | |
| 19.9 | 0.2 | 20.1 | 29.3 | −5.4 | 23.9 | |
| 21.7 | −15.4 | 6.3 | 32.8 | — | — | |
| 20.7 | 7.5 | 28.2 | 28.5 | −4.4 | 26.1 | |
| 19.7 | 6.8 | 26.5 | 27.7 | 3.6 | 24.1 | |
| 15.0 | −6.0 | 21.0 | 23.6 | −4.6 | 19.0 | |
| 14.3 | 0.6 | 14.9 | 17.9 | 3.6 | 21.5 | |
| 7.7 | −5.0 | 2.7 | 11.9 | — | — | |
| 33.2 | −2.9 | 30.3 | 41.1 | — | — | |
| 35.6 | — | — | 45.7 | — | — | |
| 21.1 | 5.8 | 26.9 | 28.9 | 5.0 | 33.9 | |
| 13.5 | 6.1 | 19.6 | 17.9 | 4.9 | 22.8 | |
| 8.7 | 7.3 | 16.0 | 17.9 | −2.8 | 15.1 | |
| 11.1 | 12.6 | 23.7 | 19.5 | 11.9 | 31.4 | |
| 11.5 | 7.8 | 19.3 | 20.8 | — | — | |
| 10.4 | 5.3 | 15.7 | 18.5 | 4.1 | 22.6 | |
| 10.3 | 8.6 | 18.9 | 19.2 | 0.0 | 19.2 | |
| 2.2 | 5.4 | 7.6 | 5.1 | 9.5 | 14.6 | |
| 13.0 | −1.5 | 11.5 | 19.8 | — | — | |
Energies (E) in kcal/mol, of the coordination intermediates, transition states and metallacycles with respect to the 14e species and the uncoordinated C=C double bond. For each system, the energies of both isomers with the C=C trans or cis to the NHC ligand are reported. For each species, ΔE is the energy difference between the cis and the trans isomer, labeled as C and T, respectively.
| system | geometry | ||||||
| Δ | Δ | Δ | |||||
| T | −10.0 | 0 | −4.2 | 0 | −19.6 | 0 | |
| C | −11.3 | −1.3 | −6.6 | −2.4 | −19.8 | -0.2 | |
| T | −13.4 | 0 | −9.5 | 0 | −25.7 | 0 | |
| C | −18.6 | −5.2 | −10.2 | −0.7 | −23.4 | 2.3 | |
| T | −6.6 | 0 | −5.7 | 0 | −17.8 | 0 | |
| C | −14.6 | −8.0 | −10.4 | −4.7 | −23.2 | −5.4 | |
| T | −11.9 | 0 | −10.9 | 0 | −23.6 | 0 | |
| C | −15.3 | −3.4 | −8.7 | 2.2 | −22.5 | 1.1 | |
| T | −17.0 | 0 | −13.1 | 0 | −30.2 | 0 | |
| C | −19.1 | −2.1 | −5.6 | 7.5 | −18.0 | 12.2 | |
| T | −15.5 | 0 | −11.4 | 0 | −25.2 | 0 | |
| C | −13.6 | 1.9 | −7.8 | 3.6 | −20.8 | 4.4 | |
| T | −11.8 | 0 | −10.1 | 0 | −25.0 | 0 | |
| C | −14.7 | −2.9 | −6.2 | 3.9 | −19.0 | 6.0 | |
| T | −9.9 | 0 | −7.2 | 0 | −21.9 | 0 | |
| C | −14.7 | −4.8 | −6.9 | 0.3 | −19.5 | 2.4 | |
| T | −7.8 | 0 | −6.7 | 0 | −14.2 | 0 | |
| C | −16.3 | −8.5 | −9.7 | −3.0 | −20.2 | −6.0 | |
| T | 1.1 | 0 | 0.6 | 0 | −9.1 | 0 | |
| C1 | −9.7 | −10.8 | −0.9 | −1.5 | −11.4 | −2.3 | |
| C2 | −5.7 | −6.8 | 0.6 | 0.0 | −15.0 | −5.9 | |
| T | 3.1 | 0 | 3.2 | 0 | −20.6 | 0 | |
| C | −33.5 | −36.6 | −24.0 | −27.1 | −39.1 | −18.5 | |
| C (S1) | −27.5 | 0 | −21.9 | 0 | −35.6 | 0 | |
| C(S2) | −34.3 | −6.8 | −26.6 | −4.7 | −37.6 | −2.0 | |
| C(O) | −29.4 | −1.9 | −18.7 | −2.8 | −37.5 | −1.9 | |
| T | −14.6 | 0 | −13.0 | 0 | −26.3 | 0 | |
| C | −19.7 | −5.1 | −9.5 | 3.5 | −23.9 | 2.4 | |
| T | −8.8 | 0 | −4.9 | 0 | −22.4 | 0 | |
| C | −12.7 | −3.9 | −4.8 | 0.1 | −20.1 | 2.3 | |
| T | 4.5 | 0 | 19.0 | 0 | 7.7 | 0 | |
| C-re | 9.7 | 5.2 | 20.2 | 1.2 | 15.9 | 8.2 | |
| C-si | 14.4 | 9.9 | 20.7 | 1.7 | 17.1 | 9.4 | |
| T | 0.1 | 0 | 1.0 | 0 | −3.3 | 0 | |
| C-re | −5.9 | −6.0 | 4.0 | 3.0 | −1.8 | 2.5 | |
| C-si | −8.1 | −8.2 | 4.5 | 3.5 | 2.2 | 5.5 | |
| T | −1.8 | 0 | 0.6 | 0 | −2.7 | 0 | |
| C-re | −1.5 | 0.3 | 12.6 | 12.0 | 8.4 | 11.1 | |
| C-si | 2.4 | 4.2 | 19.9 | 19.3 | 12.1 | 14.8 | |
| T | 0.0 | 0 | 2.7 | 0 | −0.2 | 0 | |
| C-re | −4.6 | −4.6 | 11.2 | 8.5 | 7.4 | 7.6 | |
| C-si | −0.8 | −0.8 | 12.8 | 10.1 | 5.5 | 5.7 | |
| T | −0.1 | 0 | 0.5 | 0 | −4.7 | 0 | |
| C-re | −2.1 | −2.0 | 2.4 | 1.9 | −3.8 | 0.9 | |
| C-si | −2.4 | −2.3 | 6.8 | 6.3 | 7.4 | 12.1 | |
| T | 1.3 | 0 | 2.1 | 0 | −2.7 | 0 | |
| C-re | −2.7 | −4.0 | 6.9 | 4.8 | 0.9 | 3.6 | |
| C-si | −7.7 | −9.0 | 13.2 | 11.1 | 7.3 | 10.0 | |
| T | −0.7 | 0 | 0.7 | 0 | −4.2 | 0 | |
| C-re | −0.9 | −0.2 | 14.7 | 14.0 | 11.8 | 16.0 | |
| C-si | −2.8 | −2.1 | 16.7 | 16.0 | 12.9 | 17.1 | |
Figure 1a) Naked 14e species for system 9 (distance in Å). b) trans (T); c) cis(S) (C(S)); and d) cis(O) (C(O)) C2H4 coordinated species for 12.
Figure 2Coordinated species for species a) 13a and b) 13b.
Figure 3Naked 14e species for system 14 with the O atom of the substrate coordinated to the Ru center (distance in Å), part a; and representative coordination geometries for systems 7, 11 and 14 with a cis coordinated C2H4 molecule, parts b–d.
Figure 4System 9 with a Ru…F interaction in the cis and trans geometries, parts a and b, respectively (distance in Å).
Figure 5Representative geometries of the metallacycles 7 and 15, parts a and b, respectively (distance in Å).
Figure 6Energy profiles for systems 1 and 14.
Figure 7Energy profiles for systems 7 and 16.
Figure 8Metallocycle and cyclopropane formation energy profile (energies in kcal/mol).