| Literature DB >> 26664492 |
Sudarat Chadsuthi1, Sopon Iamsirithaworn2, Wannapong Triampo3, Charin Modchang4.
Abstract
Influenza is a worldwide respiratory infectious disease that easily spreads from one person to another. Previous research has found that the influenza transmission process is often associated with climate variables. In this study, we used autocorrelation and partial autocorrelation plots to determine the appropriate autoregressive integrated moving average (ARIMA) model for influenza transmission in the central and southern regions of Thailand. The relationships between reported influenza cases and the climate data, such as the amount of rainfall, average temperature, average maximum relative humidity, average minimum relative humidity, and average relative humidity, were evaluated using cross-correlation function. Based on the available data of suspected influenza cases and climate variables, the most appropriate ARIMA(X) model for each region was obtained. We found that the average temperature correlated with influenza cases in both central and southern regions, but average minimum relative humidity played an important role only in the southern region. The ARIMAX model that includes the average temperature with a 4-month lag and the minimum relative humidity with a 2-month lag is the appropriate model for the central region, whereas including the minimum relative humidity with a 4-month lag results in the best model for the southern region.Entities:
Mesh:
Year: 2015 PMID: 26664492 PMCID: PMC4667155 DOI: 10.1155/2015/436495
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
Figure 1The spatial distribution of weather stations (red stars) in the central (blue area) and southern (green area) regions.
Figure 2The recorded climate time-series, average temperature (°C), amount of rainfall (mm), average maximum relative humidity (percent), and average minimum relative humidity (percent).
The range of climatic parameters in Thailand, 2009–2014.
| Climate factor | Range | Mean ± S.D. | |
|---|---|---|---|
| Central | Rainfall | 4.0–287.07 | 149.42 ± 64.6 |
| Average temperature | 24.24–31.6 | 28.8 ± 1.4 | |
| Maximum relative humidity | 66.7–90.6 | 81.0 ± 4.3 | |
| Minimum relative humidity | 37.8–64.0 | 54.4 ± 6.1 | |
| Average relative humidity | 53.4–76.1 | 65.2 ± 5.0 | |
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| |||
| Southern | Rainfall | 18.7–621.0 | 201.0 ± 86.7 |
| Average temperature | 26.2–29.7 | 27.8 ± 0.7 | |
| Maximum relative humidity | 88.9–96.9 | 92.5 ± 1.6 | |
| Minimum relative humidity | 42.2–70.2 | 58.5 ± 5.3 | |
| Average relative humidity | 68.5–84.3 | 76.3 ± 3.5 | |
Rainfall in mm, temperature in °C, and relative humidity in percent.
Figure 3Time-series for influenza cases in the central and southern regions.
Central region: cross-correlations between the prewhitened climate and case time-series during 2009–2013.
| Variable | Lag | ||||
|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | 4 | |
| Rainfall | 0.346 | 0.391 | 0.344 | 0.363 | 0.286 |
|
| 0.0068 | 0.0022 | 0.0082 | 0.0055 | 0.0325 |
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| 0.007 | 0.042 | 0.219 | 0.440 | 0.504 |
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| 0.9578 | 0.7508 | 0.0980 | 0.0006 | <0.0001 |
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| RHmax | 0.411 | 0.427 | 0.247 | 0.141 | 0.130 |
|
| 0.0011 | 0.0008 | 0.0611 | 0.2940 | 0.3382 |
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| RHmin | 0.498 | 0.533 | 0.342 | 0.191 | 0.048 |
|
| <0.0001 | <0.0001 | 0.0086 | 0.1543 | 0.7269 |
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| RHmean | 0.460 | 0.474 | 0.283 | 0.162 | 0.081 |
|
| 0.0002 | 0.0001 | 0.0314 | 0.2294 | 0.5551 |
P < 0.05, P < 0.01, and P < 0.001.
Southern region: cross-correlations between the prewhitened climate time-series and case time-series during 2009–2013.
| Variable | Lag | ||||
|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | 4 | |
| Rainfall | 0.098 | −0.118 | 0.058 | 0.008 | −0.041 |
|
| 0.4549 | 0.3723 | 0.6643 | 0.9507 | 0.7634 |
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| −0.145 | −0.004 | 0.111 | 0.281 | 0.401 |
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| 0.2701 | 0.9741 | 0.4078 | 0.0340 | 0.0022 |
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| RHmax | −0.035 | −0.326 | −0.017 | −0.026 | 0.140 |
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| 0.7918 | 0.0118 | 0.8963 | 0.8453 | 0.3049 |
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| RHmin | 0.139 | 0.066 | 0.147 | 0.052 | −0.120 |
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| 0.2888 | 0.6183 | 0.2696 | 0.6995 | 0.3775 |
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| RHmean | 0.082 | −0.080 | 0.098 | 0.032 | −0.055 |
|
| 0.5335 | 0.5451 | 0.4628 | 0.8106 | 0.6899 |
P < 0.05, P < 0.01, and P < 0.001.
Summary of ARIMA model fitting parameters in the central region during 2009–2014.
| Model | Fit | Pred. | Climate variables | |||
|---|---|---|---|---|---|---|
| RMSE | AIC | RMSE | Vars | Coef. |
| |
| (1) ARIMA(1, 0, 2)(1, 0, 0)12 | 0.4550 | 89.74 | 0.7837 | |||
| (2) ARIMAX(1, 0, 2)(1, 0, 0)12 with Rainfall | 0.4425 | 88.01 | 0.7810 | Rainfall (lag 0) | −0.1234 | 0.046 |
| (3) ARIMAX(1, 0, 2)(1, 0, 0)12 with Rainfall | 0.4420 | 86.42 | 0.8339 | Rainfall (lag 1) | 0.1374 | 0.0241 |
| (4) ARIMAX(1, 0, 2)(1, 0, 0)12 with Rainfall | 0.4584 | 89.99 | 0.8045 | Rainfall (lag 2) | 0.0643 | 0.1989 |
| (5) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.4344 | 82.36 | 0.7042 |
| −0.2806 | 0.8523 |
| (6) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.4224 | 84.13 | 0.8139 |
| 3.9727 | 0.0356 |
| (7) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmax | 0.4536 | 91.47 | 0.7989 | RHmax (lag 0) | −0.4727 | 0.6001 |
| (8) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmax | 0.4442 | 86.95 | 0.7586 | RHmax (lag 1) | 1.9988 | 0.0392 |
| (9) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmin | 0.4549 | 91.73 | 0.7843 | RHmin (lag 0) | −0.0469 | 0.6372 |
| (10) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmin | 0.4170 | 79.37 | 0.8880 | RHmin (lag 1) | 2.0353 | 0.0003 |
| (11) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmin | 0.4439 | 85.90 | 0.6760 | RHmin (lag 2) | −1.3507 | 0.0256 |
| (12) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmean | 0.4544 | 91.59 | 0.7911 | RHmean (lag 0) | −0.2535 | 0.7034 |
| (13) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmean | 0.4355 | 84.52 | 0.7896 | RHmean (lag 1) | 1.7995 | 0.0090 |
| (14) ARIMAX(1, 0, 2)(1, 0, 0)12 with RHmean | 0.4571 | 89.21 | 0.7390 | RHmean (lag 2) | −0.7104 | 0.3375 |
| (15) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.3998 | 74.98 | 0.7507 |
| 4.4553 | 0.0001 |
| (16) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.3922 | 70.78 | 0.9337 |
| 3.8566 | 0.0267 |
| (17) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.3786 | 72.82 | 0.5792 |
| 3.8699 | <0.0001 |
| (18) ARIMAX(1, 0, 2)(1, 0, 0)12 with | 0.3786 | 72.14 | 0.8027 |
| 4.9256 | <0.0001 |
ARIMAX: autoregressive integrated moving average with input series; fit: fitting results; RMSE: root mean square error; AIC: Akaike's Information Criterion; Pred.: prediction of ARIMA model; Coef.: coefficient of climate variables; lag: time lag of climate variables.
Summary of the ARIMA model fitting parameters in southern region during 2009–2014.
| Model | Fit | Pred. | Climate variables | |||
|---|---|---|---|---|---|---|
| RMSE | AIC | RMSE | Vars | Coef. |
| |
| (1) ARIMA(1, 0, 2)(0, 0, 1)12 | 0.3486 | 57.74 | 0.2496 | |||
| (2) ARIMAX(1, 0, 2)(0, 0, 1)12 with | 0.3415 | 56.65 | 0.3062 |
| −1.8054 | 0.6023 |
| (3) ARIMAX(1, 0, 2)(0, 0, 1)12 with | 0.3471 | 56.46 | 0.2235 |
| 2.6311 | 0.4453 |
| (4) ARIMAX(1, 0, 2)(0, 0, 1)12 with RHmax | 0.3480 | 58.44 | 0.2748 | RHmax (lag 1) | −1.5168 | 0.6160 |
| (5) ARIMAX(1, 0, 2)(0, 0, 1)12 with | 0.3483 | 57.49 | 0.2589 |
| 3.3490 | 0.3580 |
ARIMAX: autoregressive integrated moving average with input series; fit: fitting results; RMSE: root mean square error; AIC: Akaike's Information Criterion; Pred.: prediction of ARIMA model; Coef.: coefficient of climate variables; lag: time lag of climate variables.
Figure 4Fitted (blue line) and predicted (red line) values from model 17 (ARIMA(1, 0, 2)(1, 0, 0)12 with average temperature (lag 4) and minimum relative humidity (lag 2)) compared with influenza cases (dot) in the central region.
Figure 5Fitted (blue line) and predicted (red line) values from model 3 (ARIMA(1, 0, 2)(0, 0, 1)12 with average temperature (lag 4)) compared with influenza cases (dot) in southern region.