| Literature DB >> 26664124 |
Mihai Dumitru Porojan1, Andreea Cătană2, Radu A Popp2, Dan L Dumitrascu1, Cornelia Bala3.
Abstract
Type 2 diabetes mellitus (T2DM) remains one of the major health problems in Europe. Retinopathy is one of the major causes of morbidity in T2DM, strongly influencing the evolution and prognosis of these patients. In the last 2 decades, several studies have been conducted to identify the possible genetic susceptibility factors involved in the pathogenesis of the disease. However, there is little data related to the involvement of vascular endothelial growth factor (VEGF) and nitric oxide synthase (NOS) gene polymorphisms in the T2DM Caucasian population. The objective of this study was to identify a possible connection between NOS2A -954G/C (rs2297518) and VEGF +936C/T (rs3025039) polymorphisms and the risk of developing T2DM and nonproliferative diabetic retinopathy in a Caucasian population group. We investigated 200 patients diagnosed with T2DM and 208 controls. Genotypes were determined by multiplex polymerase chain reaction-restriction fragment length polymorphism. Statistical and comparative analyses (Fisher's exact test) for dominant and recessive models of NOS2A -954G/C and VEGF +936C/T polymorphisms revealed an increased risk of T2DM (χ (2)=8.14, phi =0.141, P=0.004, odds ratio [OR] =2.795, 95% confidence interval [CI] =1.347-5.801; χ (2)=18.814, phi =0.215, P<0.001, OR =2.59, 95% CI =1.675-4.006, respectively). Also, comparative analysis for the recessive model (using Pearson's chi-square test [χ (2)] and the phi coefficient [phi]) reveals that the variant CC genotype of NOS2A gene is more frequently associated with T2DM without retinopathy (χ (2)=3.835, phi =-0.138, P=0.05, OR =0.447, 95% CI =0.197-1.015). In conclusion, the results of the study place VEGF +936C/T polymorphisms among the genetic risk factor for T2DM, whereas NOS2A -954G/C polymorphisms act like a protective individual factor for nonproliferative retinopathy.Entities:
Keywords: +936C/T variant of VEGF gene; T2DM; retinopathy; type 2 diabetes mellitus; −954G/C of NOS2A gene
Year: 2015 PMID: 26664124 PMCID: PMC4669928 DOI: 10.2147/TCRM.S93172
Source DB: PubMed Journal: Ther Clin Risk Manag ISSN: 1176-6336 Impact factor: 2.423
Specific thermocycling conditions and resulting DNA fragments
| Gene variant | Primer sequence | Thermocycling conditions | Restriction enzyme | Fragments |
|---|---|---|---|---|
| F3′-CATATGTATGGGAATACTGTATTTCAG-5′ | 94°C/30 s, 61°C/45 s, 72°C/75 s, and 72°C/10 min | BsaI | GG (437 and 136 bp) | |
| R5′-TCTGAACTAGTCACTTGAGG-3′ | GC (573, 437, and 136 bp) | |||
| CC (573 bp) | ||||
| F3′-AAGGAAGAGGAGACTCTGCGCAGAGC-5′ | 94°C/30 s, 64°C/1 min, 72°C/75 s, and 72°C/5 min | NlaIII | CC (208 bp) | |
| R5′-TAAATGTATGTATGTGGGTGGGTGTGTCTACAGG-3′ | CT (208, 122, and 86 bp) | |||
| TT (122 and 86 bp) |
Abbreviations: NOS, nitric oxide synthase; F, forward; R, reverse; s, second; min, minute; VEGF, vascular endothelial growth factor.
Demographic characteristics and clinical data of the diabetic and control subjects
| Diabete subjects (n=200) | Control subjects (n=208) | OR | 95% CI | ||
|---|---|---|---|---|---|
| Age | 63.84±12.59 | 54.78±15 | 1.231 | 0.843–1.781 | 0.001 |
| Fasting blood sugar | 122.9±41.64 | 88.4±11 | 1.132 | 0.723–1.825 | 0.376 |
| Weight (kg) | 81.4±17.3 | 81.7±13.9 | 1.241 | 0.872–1.721 | 0.943 |
| Body mass index (kg/m2) | 27.8±6.1 | 25.1±5.1 | 1.132 | 0.763–1.739 | 0.219 |
| Abdominal circumference (cm) | 90.4±11.8 | 87.9±10.3 | 1.192 | 0.812–1.769 | 0.731 |
| Systolic blood pressure (mmHg) | 124.51±15.35 | 120.71±17.25 | 1.251 | 0.629–1.871 | 0.312 |
| Diastolic blood pressure (mmHg) | 72.03±10.07 | 69.73±9.17 | 1.272 | 0.682–1.897 | 0.341 |
| Disease’s duration (years) | 7.2±5.4 | N/A | N/A | N/A | N/A |
| Cholesterol (mg/dL) | 196.64±46.45 | 188.73±36.74 | 1.328 | 0.742–1.802 | 0.493 |
| HDL (mg/dL) | 46.14±10.07 | 49.04±11.71 | 1.287 | 0.620–1.891 | 0.529 |
| LDL (mg/dL) | 98.88±9.77 | 91.22±10.23 | 1.321 | 0.686–1.832 | 0.319 |
| Triglyceride (mg/dL) | 159.48±48.30 | 154.03±83.75 | 1.378 | 0.789–1.875 | 0.683 |
| HbA1c | 6.95±0.8 | N/A | N/A | N/A | N/A |
| Males, n (%) | 101 (50.5) | 93 (44.71) | 1.262 | 0.855–1.862 | 0.275 |
| Retinopathy, n (%) | 123 (61.5) | N/A | N/A | N/A | N/A |
Notes: Data shown as mean ± SD unless otherwise specified.
Abbreviations: OR, odds ratio; CI, confidence interval; SD, standard deviation; N/A, not applicable; HDL, high-density lipoprotein; LDL, low-density lipoprotein; HbA1c, glycosylated hemoglobin.
Genotype distribution and frequency of alleles in diabetic and control subjects
| Polymorphisms | Variant | Diabetic subjects, n (%) | Control subjects, n (%) | OR (95% CI) | |
|---|---|---|---|---|---|
| NOS | G/G | 92 (46) | 149 (71.63) | 0.337 (0.223–0.508) | <0.001 |
| G/C | 81 (40.5) | 48 (23.08) | 2.268 (1.477–3.483) | <0.001 | |
| C/C | 27 (13.5) | 11 (5.29) | 2.795 (1.346–5.801) | 0.005 | |
| G/C + C/C | 108 (54) | 59 (28.37) | 2.964 (1.967–4.467) | <0.001 | |
| G allele frequency | 265 (66.25) | 346 (83.17) | 0.397 (0.285–0.552) | <0.001 | |
| C allele frequency | 135 (33.75) | 70 (16.83) | 2.518 (1.810–3.502) | <0.001 | |
| VEGF | C/C | 118 (59) | 164 (78.85) | 0.386 (0.249–0.597) | <0.001 |
| C/T | 60 (30) | 38 (18.27) | 1.917 (1.205–3.048) | 0.007 | |
| T/T | 22 (11) | 6 (2.88) | 4.161 (1.650–10.492) | 0.001 | |
| C/T + T/T | 82 (41) | 44 (21.15) | 2.590 (1.674–4.005) | <0.001 | |
| C allele frequency | 296 (74) | 366 (87.98) | 0.388 (0.268–0.563) | <0.001 | |
| T allele frequency | 104 (26) | 50 (12.02) | 2.571 (1.775–3.725) | <0.001 |
Abbreviations: OR, odds ratio; CI, confidence interval; NOS, nitric oxide synthase; VEGF, vascular endothelial growth factor.