Literature DB >> 26663762

Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria.

Paul M D'Agostino1, Jason N Woodhouse1, A Katharina Makower2, Anna C Y Yeung1, Sarah E Ongley1, Melinda L Micallef3, Michelle C Moffitt3, Brett A Neilan1.   

Abstract

A common misconception persists that the genomes of toxic and non-toxic cyanobacterial strains are largely conserved with the exception of the presence or absence of the genes responsible for toxin production. Implementation of -omics era technologies has challenged this paradigm, with comparative analyses providing increased insight into the differences between strains of the same species. The implementation of genomic, transcriptomic and proteomic approaches has revealed distinct profiles between toxin-producing and non-toxic strains. Further, metagenomics and metaproteomics highlight the genomic potential and functional state of toxic bloom events over time. In this review, we highlight how these technologies have shaped our understanding of the complex relationship between these molecules, their producers and the environment at large within which they persist.
© 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2016        PMID: 26663762     DOI: 10.1111/1758-2229.12366

Source DB:  PubMed          Journal:  Environ Microbiol Rep        ISSN: 1758-2229            Impact factor:   3.541


  4 in total

Review 1.  A Metagenomic Approach to Cyanobacterial Genomics.

Authors:  Danillo O Alvarenga; Marli F Fiore; Alessandro M Varani
Journal:  Front Microbiol       Date:  2017-05-09       Impact factor: 5.640

2.  Biogeography of soil bacteria and archaea across France.

Authors:  Battle Karimi; Sébastien Terrat; Samuel Dequiedt; Nicolas P A Saby; Walid Horrigue; Mélanie Lelièvre; Virginie Nowak; Claudy Jolivet; Dominique Arrouays; Patrick Wincker; Corinne Cruaud; Antonio Bispo; Pierre-Alain Maron; Nicolas Chemidlin Prévost Bouré; Lionel Ranjard
Journal:  Sci Adv       Date:  2018-07-04       Impact factor: 14.136

Review 3.  Diversity, Ecology, and Prevalence of Antimicrobials in Nature.

Authors:  Megan M Mullis; Ian M Rambo; Brett J Baker; Brandi Kiel Reese
Journal:  Front Microbiol       Date:  2019-11-14       Impact factor: 5.640

Review 4.  To Die or Not to Die-Regulated Cell Death and Survival in Cyanobacteria.

Authors:  Natasha S Barteneva; Ayagoz Meirkhanova; Dmitry Malashenkov; Ivan A Vorobjev
Journal:  Microorganisms       Date:  2022-08-17
  4 in total

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