Literature DB >> 26659211

SNaPBceBcon: a Practical Tool for Identification and Genotyping of Burkholderia cepacia and Burkholderia contaminans.

Ricardo Araujo1, Rita Caramalho2, Carla Coutinho3, Isabel Sá-Correia3.   

Abstract

We propose an optimized protocol for an extensive population analysis of Burkholderia cepacia and Burkholderia contaminans. Seven new polymorphisms were added to the recently proposed SNaPBcen assay, and a total of 18 markers ensured the clear identification and distinction of B. cepacia and B. contaminans isolates and high genotypic discrimination (Simpson index of 0.94) compared to those for multilocus sequence typing.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID： 26659211      PMCID： PMC4733165          DOI： 10.1128/JCM.02476-15

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  29 in total

1.  Burkholderia stagnalis sp. nov. and Burkholderia territorii sp. nov., two novel Burkholderia cepacia complex species from environmental and human sources.

Authors:  Birgit De Smet; Mark Mayo; Charlotte Peeters; James E A Zlosnik; Theodore Spilker; Trevor J Hird; John J LiPuma; Timothy J Kidd; Mirjam Kaestli; Jennifer L Ginther; David M Wagner; Paul Keim; Scott C Bell; Jan A Jacobs; Bart J Currie; Peter Vandamme
Journal:  Int J Syst Evol Microbiol       Date:  2015-04-14       Impact factor: 2.747

2.  Multilocus sequence typing scheme that provides both species and strain differentiation for the Burkholderia cepacia complex.

Authors:  Adam Baldwin; Eshwar Mahenthiralingam; Kathleen M Thickett; David Honeybourne; Martin C J Maiden; John R Govan; David P Speert; John J Lipuma; Peter Vandamme; Chris G Dowson
Journal:  J Clin Microbiol       Date:  2005-09       Impact factor: 5.948

3.  16S rRNA gene sequencing versus the API 20 NE system and the VITEK 2 ID-GNB card for identification of nonfermenting Gram-negative bacteria in the clinical laboratory.

Authors:  P P Bosshard; R Zbinden; S Abels; B Böddinghaus; M Altwegg; E C Böttger
Journal:  J Clin Microbiol       Date:  2006-04       Impact factor: 5.948

4.  Exceptionally high representation of Burkholderia cepacia among B. cepacia complex isolates recovered from the major Portuguese cystic fibrosis center.

Authors:  Mónica V Cunha; Ana Pinto-de-Oliveira; Luís Meirinhos-Soares; Maria José Salgado; José Melo-Cristino; Susana Correia; Celeste Barreto; Isabel Sá-Correia
Journal:  J Clin Microbiol       Date:  2007-03-14       Impact factor: 5.948

5.  Prevalence of indeterminate genetic species of Burkholderia cepacia complex in a cystic fibrosis center in Argentina.

Authors:  Liliana Jordá-Vargas; José Degrossi; Nancy C Castañeda; Miguel D'Aquino; Miguel A Valvano; Adriana Procopio; Laura Galanternik; Daniela Centrón
Journal:  J Clin Microbiol       Date:  2008-01-16       Impact factor: 5.948

6.  Transmission of Burkholderia cepacia complex: evidence for new epidemic clones infecting cystic fibrosis patients in Italy.

Authors:  S Campana; G Taccetti; N Ravenni; F Favari; L Cariani; A Sciacca; D Savoia; A Collura; E Fiscarelli; G De Intinis; M Busetti; A Cipolloni; A d'Aprile; E Provenzano; I Collebrusco; P Frontini; G Stassi; M Trancassini; D Tovagliari; A Lavitola; C J Doherty; T Coenye; J R W Govan; P Vandamme
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

Review 7.  Feasibility of mini-sequencing schemes based on nucleotide polymorphisms for microbial identification and population analyses.

Authors:  Ricardo Araujo; Nadia Eusebio; Rita Caramalho
Journal:  Appl Microbiol Biotechnol       Date:  2015-02-12       Impact factor: 4.813

8.  Increase in isolation of Burkholderia contaminans from Spanish patients with cystic fibrosis.

Authors:  M J Medina-Pascual; S Valdezate; G Carrasco; P Villalón; N Garrido; J A Saéz-Nieto
Journal:  Clin Microbiol Infect       Date:  2014-10-12       Impact factor: 8.067

Review 9.  Evolving epidemiology of Pseudomonas aeruginosa and the Burkholderia cepacia complex in cystic fibrosis lung infection.

Authors:  John R W Govan; Alan R Brown; Andrew M Jones
Journal:  Future Microbiol       Date:  2007-04       Impact factor: 3.165

10.  Multilocus sequence typing breathes life into a microbial metagenome.

Authors:  Eshwar Mahenthiralingam; Adam Baldwin; Pavel Drevinek; Elke Vanlaere; Peter Vandamme; John J LiPuma; Chris G Dowson
Journal:  PLoS One       Date:  2006-12-20       Impact factor: 3.240
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  1 in total

1.  The first reported case of Burkholderia contaminans in patients with cystic fibrosis in Ireland: from the Sargasso Sea to Irish Children.

Authors:  Rachel F Power; Barry Linnane; Ruth Martin; Noelle Power; Peig Harnett; Brian Casserly; Nuala H O'Connell; Colum P Dunne
Journal:  BMC Pulm Med       Date:  2016-04-22       Impact factor: 3.317
  1 in total

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