R Gonzalo Parra1, Cristian O Rohr1, Daniel Koile2, Carolina Perez-Castro2, Patricio Yankilevich2. 1. Facultad De Ciencias Exactas Y Naturales, Universidad De Buenos Aires, Buenos Aires, Argentina and. 2. Instituto De Investigacion En Biomedicina De Buenos Aires (IBioBA), CONICET, Partner Institute of the Max Planck Society, Godoy Cruz 2390, Buenos Aires C1425FQA, Argentina.
Abstract
UNLABELLED: INSECT is a user-friendly web server to predict the occurrence of Cis-Regulatory Modules (CRMs), which control gene expression. Here, we present a new release of INSECT which includes several new features, such as whole genome analysis, nucleosome occupancy predictions, and which provides additional links to third-party functional tools that complement user capabilities, CRM analysis and hypothesis construction. Improvements in the core implementation have led to a faster and more efficient tool. In addition, this new release introduces a new interface designed for a more integrative and dynamic user experience. AVAILABILITY AND IMPLEMENTATION: http://bioinformatics.ibioba-mpsp-conicet.gov.ar/INSECT2 CONTACT: pyankilevich@ibioba-mpsp-conicet.gov.ar.
UNLABELLED: INSECT is a user-friendly web server to predict the occurrence of Cis-Regulatory Modules (CRMs), which control gene expression. Here, we present a new release of INSECT which includes several new features, such as whole genome analysis, nucleosome occupancy predictions, and which provides additional links to third-party functional tools that complement user capabilities, CRM analysis and hypothesis construction. Improvements in the core implementation have led to a faster and more efficient tool. In addition, this new release introduces a new interface designed for a more integrative and dynamic user experience. AVAILABILITY AND IMPLEMENTATION: http://bioinformatics.ibioba-mpsp-conicet.gov.ar/INSECT2 CONTACT: pyankilevich@ibioba-mpsp-conicet.gov.ar.
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