Literature DB >> 26651871

Structure, Bonding, and Stability of Mercury Complexes with Thiolate and Thioether Ligands from High-Resolution XANES Spectroscopy and First-Principles Calculations.

Alain Manceau, Cyprien Lemouchi, Mauro Rovezzi1, Martine Lanson, Pieter Glatzel1, Kathryn L Nagy2, Isabelle Gautier-Luneau, Yves Joly, Mironel Enescu3.   

Abstract

We present results obtained from high energy-resolution L3-edge XANES spectroscopy and first-principles calculations for the structure, bonding, and stability of mercury(II) complexes with thiolate and thioether ligands in crystalline compounds, aqueous solution, and macromolecular natural organic matter (NOM). Core-to-valence XANES features that vary in intensity differentiate with unprecedented sensitivity the number and identity of Hg ligands and the geometry of the ligand environment. Post-Hartree-Fock XANES calculations, coupled with natural population analysis, performed on MP2-optimized Hg[(SR)2···(RSR)n] complexes show that the shape, position, and number of electronic transitions observed at high energy-resolution are directly correlated to the Hg and S (l,m)-projected empty densities of states and occupations of the hybridized Hg 6s and 5d valence orbitals. Linear two-coordination, the most common coordination geometry in mercury chemistry, yields a sharp 2p to 6s + 5d electronic transition. This transition varies in intensity for Hg bonded to thiol groups in macromolecular NOM. The intensity variation is explained by contributions from next-nearest, low-charge, thioether-type RSR ligands at 3.0-3.3 Å from Hg. Thus, Hg in NOM has two strong bonds to thiol S and k additional weak Hg···S contacts, or 2 + k coordination. The calculated stabilization energy is -5 kcal/mol per RSR ligand. Detection of distant ligands beyond the first coordination shell requires precise measurement of, and comparison to, spectra of reference compounds as well as accurate calculation of spectra for representative molecular models. The combined experimental and theoretical approaches described here for Hg can be applied to other closed-shell atoms, such as Ag(I) and Au(I). To facilitate further calculation of XANES spectra, experimental data, a new crystallographic structure of a key mercury thioether complex, Cartesian coordinates of the computed models, and examples of input files are provided as Supporting Information .

Entities:  

Year:  2015        PMID: 26651871     DOI: 10.1021/acs.inorgchem.5b01932

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  6 in total

1.  TEXS: in-vacuum tender X-ray emission spectrometer with 11 Johansson crystal analyzers.

Authors:  Mauro Rovezzi; Alistair Harris; Blanka Detlefs; Timothy Bohdan; Artem Svyazhin; Alessandro Santambrogio; David Degler; Rafal Baran; Benjamin Reynier; Pedro Noguera Crespo; Catherine Heyman; Hans Peter Van Der Kleij; Pierre Van Vaerenbergh; Philippe Marion; Hugo Vitoux; Christophe Lapras; Roberto Verbeni; Menhard Menyhert Kocsis; Alain Manceau; Pieter Glatzel
Journal:  J Synchrotron Radiat       Date:  2020-04-07       Impact factor: 2.616

2.  Nucleation of mercury sulfide by dealkylation.

Authors:  Mironel Enescu; Kathryn L Nagy; Alain Manceau
Journal:  Sci Rep       Date:  2016-12-19       Impact factor: 4.379

3.  Mercury(II) Binding to Metallothionein in Mytilus edulis revealed by High Energy-Resolution XANES Spectroscopy.

Authors:  Alain Manceau; Paco Bustamante; Ahmed Haouz; Jean Paul Bourdineaud; Maria Gonzalez-Rey; Cyprien Lemouchi; Isabelle Gautier-Luneau; Valérie Geertsen; Elodie Barruet; Mauro Rovezzi; Pieter Glatzel; Serge Pin
Journal:  Chemistry       Date:  2018-12-27       Impact factor: 5.236

4.  Asymmetrical Flow Field-Flow Fractionation Methods for Quantitative Determination and Size Characterization of Thiols and for Mercury Size Speciation Analysis in Organic Matter-Rich Natural Waters.

Authors:  Isabelle A M Worms; Killian Kavanagh; Elodie Moulin; Nicole Regier; Vera I Slaveykova
Journal:  Front Chem       Date:  2022-02-16       Impact factor: 5.221

5.  Mercury Removal from Contaminated Water by Wood-Based Biochar Depends on Natural Organic Matter and Ionic Composition.

Authors:  Sampriti Chaudhuri; Gabriel Sigmund; Sharon E Bone; Naresh Kumar; Thilo Hofmann
Journal:  Environ Sci Technol       Date:  2022-08-04       Impact factor: 11.357

6.  Single Au Atom Doping of Silver Nanoclusters.

Authors:  Marte van der Linden; Arnoldus J van Bunningen; Lucia Amidani; Maarten Bransen; Hebatalla Elnaggar; Pieter Glatzel; Andries Meijerink; Frank M F de Groot
Journal:  ACS Nano       Date:  2018-12-03       Impact factor: 15.881

  6 in total

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