| Literature DB >> 26650441 |
Stephen Ph Alexander1, William A Catterall2, Eamonn Kelly3, Neil Marrion3, John A Peters4, Helen E Benson5, Elena Faccenda5, Adam J Pawson5, Joanna L Sharman5, Christopher Southan5, Jamie A Davies5.
Abstract
The Concise Guide to PHARMACOLOGY 2015/16 provides concise overviews of the key properties of over 1750 human drug targets with their pharmacology, plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. The full contents can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13350/full. Voltage-gated ion channels are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The Concise Guide is published in landscape format in order to facilitate comparison of related targets. It is a condensed version of material contemporary to late 2015, which is presented in greater detail and constantly updated on the website www.guidetopharmacology.org, superseding data presented in the previous Guides to Receptors & Channels and the Concise Guide to PHARMACOLOGY 2013/14. It is produced in conjunction with NC-IUPHAR and provides the official IUPHAR classification and nomenclature for human drug targets, where appropriate. It consolidates information previously curated and displayed separately in IUPHAR-DB and GRAC and provides a permanent, citable, point-in-time record that will survive database updates.Entities:
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Year: 2015 PMID: 26650441 PMCID: PMC4718209 DOI: 10.1111/bph.13349
Source DB: PubMed Journal: Br J Pharmacol ISSN: 0007-1188 Impact factor: 8.739
| Nomenclature |
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| Activators | CatSper1 is constitutively
active, weakly facilitated by membrane depolarisation, strongly
augmented by intracellular alkalinisation. In human, but not mouse,
spermatozoa progesterone (EC50 8 nM) also potentiates the
CatSper current (I |
| Functional Characteristics | Calcium selective ion channel
(Ba2+>Ca2+≫Mg2+≫Na+);
quasilinear monovalent cation current in the absence of extracellular
divalent cations; alkalinization shifts the voltage‐dependence of
activation towards negative potentials [V1/2 @ pH 6.0 = +87
mV (mouse); V1/2 @ pH 7.5 = +11mV (mouse) or pH 7.4 = +85
mV (human)]; required for I |
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| Functional Characteristics | Required for I | Required for I | Required for I |
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| Functional Characteristics | Organelle voltage‐gated
Na+‐selective channel
(Na+≫K+≫Ca2+); Required for the
generation of action potential‐like long depolarization in lysosomes.
Voltage‐dependence of activation is sensitive to luminal pH
(determined from lysosomal recordings). | Organelle voltage‐independent Na+‐selective channel (Na+≫K+≫Ca2+). Sensitive to the levels of PI(3,5)P2. Activated by decreases in [ATP] or depletion of extracellular amino acids |
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| Functional Characteristics | Maxi K | SK | SK | SK |
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| Comments | – | The rat isoform does not form
functional channels when expressed alone in cell lines. N‐ or
C‐terminal chimeric constructs permit functional channels that are
insensitive to | – | – |
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| Functional Characteristics | IK | K | K | Sperm pH‐regulated K+ current, KSPER |
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| Ion Selectivity and Conductance | NH4
+ [62pS] > K+ [38. pS] > Tl+
[21pS] > Rb+ [15pS] (Rat) [ | – | – |
| Functional Characteristics | K | IK1 in heart, ‘strong’ inward‐rectifier current | IK1in heart, ‘strong’ inward‐rectifier current |
| Endogenous activators | – |
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| Endogenous inhibitors | – | – | Intracellular |
| Gating inhibitors | – | – |
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| Comments | – | K | K |
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| Functional Characteristics | IK1 in heart, ‘strong’ inward‐rectifier current | IK1 in heart, ‘strong’ inward‐rectifier current | G‐protein‐activated inward‐rectifier current | G‐protein‐activated inward‐rectifier current |
| Endogenous activators | – | – |
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| Endogenous inhibitors | – | Intracellular | – | – |
| Gating inhibitors | – | – | – |
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| Endogenous channel blockers | Intracellular | – | – | – |
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| Comments | K | K | K | K |
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| Functional Characteristics | G‐protein‐activated inward‐rectifier current | G‐protein‐activated inward‐rectifier current | Inward‐rectifier current | Inward‐rectifier current |
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| Comments | K | K | – | – |
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| Associated subunits | – | SUR1, SUR2A, SUR2B | SUR1, SUR2A, SUR2B | – |
| Functional Characteristics | Weakly inwardly rectifying | ATP‐sensitive, inward‐rectifier current | ATP‐sensitive, inward‐rectifier current | Inward‐rectifier current |
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| Functional Characteristics | Background current | Background current | Background current. Knock‐out of
the | Background current | Background current |
| Endogenous activators | – |
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| Comments | K2 | K2 | K2 | K2 | K2 |
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| Functional Characteristics | Unknown | Unknown | Background current | Background current | Unknown |
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| Comments | – | – | K2 | K2 | – |
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| Functional Characteristics | Background current | Unknown | Background current | Background current | Background current |
| Endogenous inhibitors | – | – | – | – |
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| Comments | – | – | K2 | K2 | – |
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| Associated subunits | K | K | K | K | K |
| Functional Characteristics | K | K | K | K | K |
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| Associated subunits | K | K | K | K | K |
| Functional Characteristics | K | K | K | K | – |
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| Associated subunits | – | – | – | MiRP2 is an associated subunit
for K | KChIP and KChAP |
| Functional Characteristics | K | K | K | K | K |
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| Selective channel blockers | – | – | – |
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| Associated subunits | KChIP and KChAP | KChIP and KChAP | – | – | – | – | – |
| Functional Characteristics | K | K | – | – | – | – | – |
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| Functional Characteristics | cardiac IK5 | M current | M current | – | – |
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| Associated subunits | minK (KCNE1) and MiRP1 (KCNE2) | minK (KCNE1) | minK (KCNE1) | minK (KCNE1) | minK (KCNE1) and MiRP2 (KCNE3) | – |
| Functional Characteristics | cardiac IK | – | – | – | – | – |
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| Comments |
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| Chemical activators | – |
| Other chemical activators | Isothiocyanates (covalent) and 1,4‐dihydropyridines (non‐covalent) |
| Physical activators | Cooling (<17∘C) (disputed) |
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| Chemical activators | NO‐mediated cysteine S‐nitrosation | – | diacylglycerols |
| Physical activators | membrane stretch (likely direct) | – | |
| Functional Characteristics | It is not yet clear that TRPC1 forms a homomer. It does form heteromers with TRPC4 and TRPC5 | – |
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| Chemical activators | – | – | – | diacylglycerols |
| Other chemical activators | NO‐mediated cysteine S‐nitrosation, potentiation by extracellular protons | NO‐mediated cysteine S‐nitrosation (disputed), potentiation by extracellular protons | Diacylglycerols | – |
| Physical activators | – | Membrane stretch (likely indirect) | Membrane stretch (likely indirect) | – |
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| Endogenous activators | – | intracellular |
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| Other channel blockers | – | – | – | Intracellular nucleotides
including |
| Other chemical activators | – | Agents producing reactive oxygen (e.g. H2O2) and nitrogen (e.g. GEA 3162) species | – | – |
| Physical activators | – | Heat 35∘C | heat (Q10 = 7.2
between 15 ‐ 25∘C; Vriens | Membrane depolarization
(V1/2 = ‐20 mV to + 60 mV dependent upon conditions) in
the presence of elevated [Ca2+] |
| Functional Characteristics | Conducts mono‐ and di‐valent cations non‐selectively, dual rectification (inward and outward) |
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| Endogenous activators |
| intracellular |
| intracellular |
| Activators | – |
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| EC number | – |
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| Other chemical activators | – | constitutively active, activated by reduction of intracellular Mg2+ | activation of PKA | agonist activities are temperature dependent and potentiated by cooling |
| Physical activators | membrane depolarization (V1/2 = 0 to + 120 mV dependent upon conditions), heat (Q10 = 10.3 @ ‐75 mV between 15 and 25∘C) | – | – | depolarization (V1/2 +50 mV at 15∘C), cooling (< 22‐26∘C) |
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| Endogenous activators | intracellular | extracellular | intracellular | – |
| Activators | – |
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| Comments | TRPM5 is not blocked by
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| Activators | TRPML1 | TRPML2 | TRPML3 |
| Functional Characteristics | TRPML1 | TRPML1 | TRPML3 |
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| Activators | – | Calmidazolium (in primary
cilia): 10 | – |
| Functional Characteristics | The channel properties of TRPP1 (PKD2) have not been determined with certainty | Currents have been measured
directly from primary cilia and also when expressed on plasma
membranes. Primary cilia appear to contain heteromeric TRPP2 +
PKD1‐L1, underlying a gently outwardly rectifying nonselective
conductance (P | – |
| Channel blockers | – |
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| Other chemical activators | NO‐mediated cysteine S‐nitrosation | – | NO‐mediated cysteine S‐nitrosytion |
| Physical activators | depolarization (V1/2 0 mV at 35∘C), noxious heat (> 43∘C at pH 7.4) | noxious heat (>
35∘C; rodent, not human) [ | depolarization (V1/2 +80 mV, reduced to more negative values following heat stimuli), heat (23∘C ‐ 39∘C, temperature threshold reduces with repeated heat challenge) |
| Functional Characteristics |
| Conducts mono‐ and divalent
cations (P |
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| Endogenous activators | extracellular | – | – |
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| Activators | – | constitutively active (with strong buffering of intracellular Ca2+) | constitutively active (with strong buffering of intracellular Ca2+) |
| Other channel blockers | – |
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| Other chemical activators | Epoxyeicosatrieonic acids and NO‐mediated cysteine S‐nitrosylation | – | – |
| Physical activators | Constitutively active, heat (> 24∘C ‐ 32∘C), mechanical stimuli | – | – |
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| Functional Characteristics | L‐type calcium current: High voltage‐activated, slow voltage dependent inactivation | L‐type calcium current: High voltage‐activated, slow voltage‐dependent inactivation, rapid calcium‐dependent inactivation | L‐type calcium current: Voltage‐activated, slow voltage‐dependent inactivation, more rapid calcium‐dependent inactivation | L‐type calcium current: Moderate voltage‐activated, slow voltage‐dependent inactivation | P/Q‐type calcium current: Moderate voltage‐activated, moderate voltage‐dependent inactivation |
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| Comments | – | – | Ca | Ca | – |
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| Functional Characteristics | N‐type calcium current: High voltage‐activated, moderate voltage‐dependent inactivation | R‐type calcium current: Moderate voltage‐activated, fast voltage‐dependent inactivation | T‐type calcium current: Low voltage‐activated, fast voltage‐dependent inactivation | T‐type calcium current: Low voltage‐activated, fast voltage‐dependent inactivation | T‐type calcium current: Low voltage‐activated, moderate voltage‐dependent inactivation |
| Gating inhibitors | – | – |
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| Functional Characteristics | Activated by membrane
depolarization mediating macroscopic currents with time‐, voltage‐ and
pH‐dependence; outwardly rectifying; voltage dependent kinetics with
relatively slow current activation sensitive to extracellular pH and
temperature, relatively fast deactivation; voltage threshold for
current activation determined by pH gradient ( |
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| Functional Characteristics | Activation V0.5 = ‐20
mV. Fast inactivation ( | Activation V0.5 = ‐24
mV. Fast inactivation ( | Activation V0.5 = ‐24 mV. Fast inactivation (0.8 ms) | Activation V0.5 = ‐30 mV. Fast inactivation (0.6 ms) | Activation V0.5 = ‐26
mV. Fast inactivation ( |
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| Functional Characteristics | Activation V0.5 = ‐29 mV. Fast inactivation (1 ms) | Activation V0.5 = ‐27 mV. Fast inactivation (0.5 ms) | Activation V0.5 = ‐16 mV. Inactivation (6 ms) | Activation V0.5 = ‐32 mV. Slow inactivation (16 ms) |
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