Literature DB >> 26644779

Software to Facilitate Remote Sensing Data Access for Disease Early Warning Systems.

Yi Liu1, Jiameng Hu1, Isaiah Snell-Feikema1, Michael S VanBemmel1, Aashis Lamsal2, Michael C Wimberly2.   

Abstract

Satellite remote sensing produces an abundance of environmental data that can be used in the study of human health. To support the development of early warning systems for mosquito-borne diseases, we developed an open-source, client based software application to enable the Epidemiological Applications of Spatial Technologies (EASTWeb). Two major design decisions were full automation of the discovery, retrieval and processing of remote sensing data from multiple sources, and making the system easily modifiable in response to changes in data availability and user needs. Key innovations that helped to achieve these goals were the implementation of a software framework for data downloading and the design of a scheduler that tracks the complex dependencies among multiple data processing tasks and makes the system resilient to external errors. EASTWeb has been successfully applied to support forecasting of West Nile virus outbreaks in the United States and malaria epidemics in the Ethiopian highlands.

Entities:  

Keywords:  Software architecture; West Nile virus; early warning; malaria; remote sensing; workflows

Year:  2015        PMID: 26644779      PMCID: PMC4669966          DOI: 10.1016/j.envsoft.2015.07.006

Source DB:  PubMed          Journal:  Environ Model Softw        ISSN: 1364-8152            Impact factor:   5.288


  33 in total

1.  Effects of temperature on emergence and seasonality of West Nile virus in California.

Authors:  David M Hartley; Christopher M Barker; Arnaud Le Menach; Tianchan Niu; Holly D Gaff; William K Reisen
Journal:  Am J Trop Med Hyg       Date:  2012-05       Impact factor: 2.345

2.  Weather and land cover influences on mosquito populations in Sioux Falls, South Dakota.

Authors:  Ting-Wu Chuang; Michael B Hildreth; Denise L Vanroekel; Michael C Wimberly
Journal:  J Med Entomol       Date:  2011-05       Impact factor: 2.278

3.  A high resolution spatial population database of Somalia for disease risk mapping.

Authors:  Catherine Linard; Victor A Alegana; Abdisalan M Noor; Robert W Snow; Andrew J Tatem
Journal:  Int J Health Geogr       Date:  2010-09-14       Impact factor: 3.918

4.  Landscape-level spatial patterns of West Nile virus risk in the northern Great Plains.

Authors:  Ting-Wu Chuang; Christine W Hockett; Lon Kightlinger; Michael C Wimberly
Journal:  Am J Trop Med Hyg       Date:  2012-04       Impact factor: 2.345

5.  Satellite Microwave Remote Sensing for Environmental Modeling of Mosquito Population Dynamics.

Authors:  Ting-Wu Chuang; Geoffrey M Henebry; John S Kimball; Denise L Vanroekel-Patton; Michael B Hildreth; Michael C Wimberly
Journal:  Remote Sens Environ       Date:  2012-10       Impact factor: 10.164

6.  The 2012 West Nile encephalitis epidemic in Dallas, Texas.

Authors:  Wendy M Chung; Christen M Buseman; Sibeso N Joyner; Sonya M Hughes; Thomas B Fomby; James P Luby; Robert W Haley
Journal:  JAMA       Date:  2013-07-17       Impact factor: 56.272

7.  Increasing habitat suitability in the United States for the tick that transmits Lyme disease: a remote sensing approach.

Authors:  Agustín Estrada-Peña
Journal:  Environ Health Perspect       Date:  2002-07       Impact factor: 9.031

8.  Saving Human Lives: What Complexity Science and Information Systems can Contribute.

Authors:  Dirk Helbing; Dirk Brockmann; Thomas Chadefaux; Karsten Donnay; Ulf Blanke; Olivia Woolley-Meza; Mehdi Moussaid; Anders Johansson; Jens Krause; Sebastian Schutte; Matjaž Perc
Journal:  J Stat Phys       Date:  2014-06-05       Impact factor: 1.548

9.  Comparison of enzootic risk measures for predicting West Nile disease, Los Angeles, California, USA, 2004-2010.

Authors:  Jennifer L Kwan; Bborie K Park; Tim E Carpenter; Van Ngo; Rachel Civen; William K Reisen
Journal:  Emerg Infect Dis       Date:  2012-08       Impact factor: 6.883

10.  Infectious disease in a warming world: how weather influenced West Nile virus in the United States (2001-2005).

Authors:  Jonathan E Soverow; Gregory A Wellenius; David N Fisman; Murray A Mittleman
Journal:  Environ Health Perspect       Date:  2009-03-16       Impact factor: 9.031

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  8 in total

1.  A heat vulnerability index to improve urban public health management in San Juan, Puerto Rico.

Authors:  Pablo Méndez-Lázaro; Frank E Muller-Karger; Daniel Otis; Matthew J McCarthy; Ernesto Rodríguez
Journal:  Int J Biometeorol       Date:  2017-02-17       Impact factor: 3.787

2.  A genetic algorithm for identifying spatially-varying environmental drivers in a malaria time series model.

Authors:  Justin K Davis; Teklehaymanot Gebrehiwot; Mastewal Worku; Worku Awoke; Abere Mihretie; Dawn Nekorchuk; Michael C Wimberly
Journal:  Environ Model Softw       Date:  2019-06-24       Impact factor: 5.288

3.  Cloud-based applications for accessing satellite Earth observations to support malaria early warning.

Authors:  Michael C Wimberly; Dawn M Nekorchuk; Ramcharan R Kankanala
Journal:  Sci Data       Date:  2022-05-16       Impact factor: 8.501

Review 4.  Satellite Observations and Malaria: New Opportunities for Research and Applications.

Authors:  Michael C Wimberly; Kirsten M de Beurs; Tatiana V Loboda; William K Pan
Journal:  Trends Parasitol       Date:  2021-03-25

5.  Continental-scale, data-driven predictive assessment of eliminating the vector-borne disease, lymphatic filariasis, in sub-Saharan Africa by 2020.

Authors:  Edwin Michael; Brajendra K Singh; Benjamin K Mayala; Morgan E Smith; Scott Hampton; Jaroslaw Nabrzyski
Journal:  BMC Med       Date:  2017-09-27       Impact factor: 8.775

6.  Integrating malaria surveillance with climate data for outbreak detection and forecasting: the EPIDEMIA system.

Authors:  Christopher L Merkord; Yi Liu; Abere Mihretie; Teklehaymanot Gebrehiwot; Worku Awoke; Estifanos Bayabil; Geoffrey M Henebry; Gebeyaw T Kassa; Mastewal Lake; Michael C Wimberly
Journal:  Malar J       Date:  2017-02-23       Impact factor: 2.979

7.  Evaluation of Remotely Sensed and Interpolated Environmental Datasets for Vector-Borne Disease Monitoring Using In Situ Observations Over the Amhara Region, Ethiopia.

Authors:  Woubet G Alemu; Michael C Wimberly
Journal:  Sensors (Basel)       Date:  2020-02-28       Impact factor: 3.576

8.  Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey.

Authors:  Patrick Keating; Jillian Murray; Karl Schenkel; Laura Merson; Anna Seale
Journal:  BMC Public Health       Date:  2021-09-25       Impact factor: 3.295

  8 in total

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