Literature DB >> 26636953

A Transport Model for Estimating the Time Course of ERK Activation in the C. elegans Germline.

Henry H Mattingly1, Jessica J Chen2, Swathi Arur3, Stanislav Y Shvartsman4.   

Abstract

The Caenorhabditis elegans germline is a well-studied model system for investigating the control of cell fate by signaling pathways. Cell signals at the distal tip of the germline promote cell proliferation; just before the loop, signals couple cell maturation to organism-level nutrient status; at the proximal end of the germline, signals coordinate oocyte maturation and fertilization in the presence of sperm. The latter two events require dual phosphorylation and activation of ERK, the effector molecule of the Ras/MAPK cascade. In C. elegans, ERK is known as MPK-1. At this point, none of today's methods for real-time monitoring of dually phosphorylated MPK-1 are working in the germline. Consequently, quantitative understanding of the MPK-1-dependent processes during germline development is limited. Here, we make a step toward advancing this understanding using a model-based framework that reconstructs the time course of MPK-1 activation from a snapshot of a fixed germline. Our approach builds on a number of recent studies for estimating temporal dynamics from fixed organisms, but takes advantage of the anatomy of the germline to simplify the analysis. Our model predicts that the MPK-1 signal turns on ∼30 h into germ cell progression and peaks ∼7 h later.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26636953      PMCID: PMC4675862          DOI: 10.1016/j.bpj.2015.10.021

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  A sperm cytoskeletal protein that signals oocyte meiotic maturation and ovulation.

Authors:  M A Miller; V Q Nguyen; M H Lee; M Kosinski; T Schedl; R M Caprioli; D Greenstein
Journal:  Science       Date:  2001-03-16       Impact factor: 47.728

2.  A model of stem cell population dynamics: in silico analysis and in vivo validation.

Authors:  Yaki Setty; Diana Dalfó; Dorota Z Korta; E Jane Albert Hubbard; Hillel Kugler
Journal:  Development       Date:  2012-01       Impact factor: 6.868

Review 3.  Caenorhabditis elegans germ line: a model for stem cell biology.

Authors:  E Jane Albert Hubbard
Journal:  Dev Dyn       Date:  2007-12       Impact factor: 3.780

4.  DAF-2 and ERK couple nutrient availability to meiotic progression during Caenorhabditis elegans oogenesis.

Authors:  Andrew L Lopez; Jessica Chen; Hyoe-Jin Joo; Melanie Drake; Miri Shidate; Cedric Kseib; Swathi Arur
Journal:  Dev Cell       Date:  2013-10-10       Impact factor: 12.270

5.  Pax2/5/8 proteins promote cell survival in C. elegans.

Authors:  DonHa Park; Hongtao Jia; Vandana Rajakumar; Helen M Chamberlin
Journal:  Development       Date:  2006-10-04       Impact factor: 6.868

6.  Dynamics of Inductive ERK Signaling in the Drosophila Embryo.

Authors:  Bomyi Lim; Carmeline J Dsilva; Thomas J Levario; Hang Lu; Trudi Schüpbach; Ioannis G Kevrekidis; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2015-06-18       Impact factor: 10.834

7.  Cellular analyses of the mitotic region in the Caenorhabditis elegans adult germ line.

Authors:  Sarah L Crittenden; Kimberly A Leonhard; Dana T Byrd; Judith Kimble
Journal:  Mol Biol Cell       Date:  2006-05-03       Impact factor: 4.138

8.  Analysis of Germline Stem Cell Differentiation Following Loss of GLP-1 Notch Activity in Caenorhabditis elegans.

Authors:  Paul M Fox; Tim Schedl
Journal:  Genetics       Date:  2015-07-08       Impact factor: 4.562

Review 9.  Specificity of receptor tyrosine kinase signaling: transient versus sustained extracellular signal-regulated kinase activation.

Authors:  C J Marshall
Journal:  Cell       Date:  1995-01-27       Impact factor: 41.582

10.  Intercellular propagation of extracellular signal-regulated kinase activation revealed by in vivo imaging of mouse skin.

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Journal:  Elife       Date:  2015-02-10       Impact factor: 8.140

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  5 in total

1.  A Real-Time Biosensor for ERK Activity Reveals Signaling Dynamics during C. elegans Cell Fate Specification.

Authors:  Claire de la Cova; Robert Townley; Sergi Regot; Iva Greenwald
Journal:  Dev Cell       Date:  2017-08-17       Impact factor: 12.270

Review 2.  Signaling-Mediated Regulation of Meiotic Prophase I and Transition During Oogenesis.

Authors:  Swathi Arur
Journal:  Results Probl Cell Differ       Date:  2017

Review 3.  How computational models contribute to our understanding of the germ line.

Authors:  Kathryn Atwell; Sara-Jane Dunn; James M Osborne; Hillel Kugler; E Jane Albert Hubbard
Journal:  Mol Reprod Dev       Date:  2016-10-07       Impact factor: 2.609

4.  Spatial and Temporal Analysis of Active ERK in the C. elegans Germline.

Authors:  Amanda L Gervaise; Swathi Arur
Journal:  J Vis Exp       Date:  2016-11-29       Impact factor: 1.355

5.  Long-term dynamics of multisite phosphorylation.

Authors:  Boris Y Rubinstein; Henry H Mattingly; Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  Mol Biol Cell       Date:  2016-05-25       Impact factor: 4.138

  5 in total

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