Literature DB >> 26633546

Accelerating matchmaking of novel dysmorphology syndromes through clinical and genomic characterization of a large cohort.

Ranad Shaheen1, Nisha Patel1, Hanan Shamseldin1, Fatema Alzahrani1, Ruah Al-Yamany1, Agaadir ALMoisheer1, Nour Ewida1, Shamsa Anazi1, Maha Alnemer2, Mohamed Elsheikh3, Khaled Alfaleh3,4, Muneera Alshammari4, Amal Alhashem5, Abdullah A Alangari4, Mustafa A Salih4, Martin Kircher6, Riza M Daza6, Niema Ibrahim1, Salma M Wakil1, Ahmed Alaqeel7, Ikhlas Altowaijri7, Jay Shendure6, Amro Al-Habib7, Eissa Faqieh8, Fowzan S Alkuraya1,9.   

Abstract

PURPOSE: Dysmorphology syndromes are among the most common referrals to clinical genetics specialists. Inability to match the dysmorphology pattern to a known syndrome can pose a major diagnostic challenge. With an aim to accelerate the establishment of new syndromes and their genetic etiology, we describe our experience with multiplex consanguineous families that appeared to represent novel autosomal recessive dysmorphology syndromes at the time of evaluation.
METHODS: Combined autozygome/exome analysis of multiplex consanguineous families with apparently novel dysmorphology syndromes.
RESULTS: Consistent with the apparent novelty of the phenotypes, our analysis revealed a strong candidate variant in genes that were novel at the time of the analysis in the majority of cases, and 10 of these genes are published here for the first time as novel candidates (CDK9, NEK9, ZNF668, TTC28, MBL2, CADPS, CACNA1H, HYAL2, CTU2, and C3ORF17). A significant minority of the phenotypes (6/31, 19%), however, were caused by genes known to cause Mendelian phenotypes, thus expanding the phenotypic spectrum of the diseases linked to these genes. The conspicuous inheritance pattern and the highly specific phenotypes appear to have contributed to the high yield (90%) of plausible molecular diagnoses in our study cohort.
CONCLUSION: Reporting detailed clinical and genomic analysis of a large series of apparently novel dysmorphology syndromes will likely lead to a trend to accelerate the establishment of novel syndromes and their underlying genes through open exchange of data for the benefit of patients, their families, health-care providers, and the research community.Genet Med 18 7, 686-695.

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Year:  2015        PMID: 26633546     DOI: 10.1038/gim.2015.147

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  32 in total

1.  Abnormal coronary function in mice deficient in alpha1H T-type Ca2+ channels.

Authors:  Chien-Chang Chen; Kathryn G Lamping; Daniel W Nuno; Rita Barresi; Sally J Prouty; Julie L Lavoie; Leanne L Cribbs; Sarah K England; Curt D Sigmund; Robert M Weiss; Roger A Williamson; Joseph A Hill; Kevin P Campbell
Journal:  Science       Date:  2003-11-21       Impact factor: 47.728

2.  Congenital disorder of glycosylation IIa: the trouble with diagnosing a dysmorphic inborn error of metabolism.

Authors:  Anas M Alazami; Dorota Monies; Brian F Meyer; Fatema Alzahrani; Mais Hashem; Mustafa A Salih; Fowzan S Alkuraya
Journal:  Am J Med Genet A       Date:  2011-11-21       Impact factor: 2.802

3.  Standard terminology for phenotypic variations: the elements of morphology project, its current progress, and future directions.

Authors:  John C Carey; Judith E Allanson; Raoul C M Hennekam; Leslie G Biesecker
Journal:  Hum Mutat       Date:  2012-04-13       Impact factor: 4.878

4.  Retinal dystrophy in 2 brothers with α-Mannosidosis.

Authors:  Robert Jackson Courtney; Mark E Pennesi
Journal:  Arch Ophthalmol       Date:  2011-06

5.  Mental retardation, growth retardation, unusual nose, and open mouth: an autosomal recessive entity.

Authors:  Fowzan S Alkuraya
Journal:  Am J Med Genet A       Date:  2010-09       Impact factor: 2.802

6.  Recessive mutations in ELOVL4 cause ichthyosis, intellectual disability, and spastic quadriplegia.

Authors:  Mohammed A Aldahmesh; Jawahir Y Mohamed; Hisham S Alkuraya; Ishwar C Verma; Ratna D Puri; Ayodele A Alaiya; William B Rizzo; Fowzan S Alkuraya
Journal:  Am J Hum Genet       Date:  2011-11-17       Impact factor: 11.025

7.  Absence of BiP co-chaperone DNAJC3 causes diabetes mellitus and multisystemic neurodegeneration.

Authors:  Matthis Synofzik; Tobias B Haack; Robert Kopajtich; Matteo Gorza; Doron Rapaport; Markus Greiner; Caroline Schönfeld; Clemens Freiberg; Stefan Schorr; Reinhard W Holl; Michael A Gonzalez; Andreas Fritsche; Petra Fallier-Becker; Richard Zimmermann; Tim M Strom; Thomas Meitinger; Stephan Züchner; Rebecca Schüle; Ludger Schöls; Holger Prokisch
Journal:  Am J Hum Genet       Date:  2014-11-20       Impact factor: 11.025

8.  Multiple suture synostosis, macrocephaly, and intracranial hypertension in a child with alpha-D-mannosidase deficiency. Case report.

Authors:  P A Grabb; A L Albright; B J Zitelli
Journal:  J Neurosurg       Date:  1995-04       Impact factor: 5.115

9.  CAPS1 and CAPS2 regulate stability and recruitment of insulin granules in mouse pancreatic beta cells.

Authors:  Dina Speidel; Albert Salehi; Stefanie Obermueller; Ingmar Lundquist; Nils Brose; Erik Renström; Patrik Rorsman
Journal:  Cell Metab       Date:  2008-01       Impact factor: 27.287

10.  Skeletal and hematological anomalies in HYAL2-deficient mice: a second type of mucopolysaccharidosis IX?

Authors:  Laurence Jadin; Xiaoli Wu; Hao Ding; Gregory I Frost; Cécile Onclinx; Barbara Triggs-Raine; Bruno Flamion
Journal:  FASEB J       Date:  2008-09-04       Impact factor: 5.191

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  20 in total

1.  Clinical genomics expands the morbid genome of intellectual disability and offers a high diagnostic yield.

Authors:  S Anazi; S Maddirevula; E Faqeih; H Alsedairy; F Alzahrani; H E Shamseldin; N Patel; M Hashem; N Ibrahim; F Abdulwahab; N Ewida; H S Alsaif; H Al Sharif; W Alamoudi; A Kentab; F A Bashiri; M Alnaser; A H AlWadei; M Alfadhel; W Eyaid; A Hashem; A Al Asmari; M M Saleh; A AlSaman; K A Alhasan; M Alsughayir; M Al Shammari; A Mahmoud; Z N Al-Hassnan; M Al-Husain; R Osama Khalil; N Abd El Meguid; A Masri; R Ali; T Ben-Omran; P El Fishway; A Hashish; A Ercan Sencicek; M State; A M Alazami; M A Salih; N Altassan; S T Arold; M Abouelhoda; S M Wakil; D Monies; R Shaheen; F S Alkuraya
Journal:  Mol Psychiatry       Date:  2016-07-19       Impact factor: 15.992

2.  Lessons Learned from Large-Scale, First-Tier Clinical Exome Sequencing in a Highly Consanguineous Population.

Authors:  Dorota Monies; Mohammed Abouelhoda; Mirna Assoum; Nabil Moghrabi; Rafiullah Rafiullah; Naif Almontashiri; Mohammed Alowain; Hamad Alzaidan; Moeen Alsayed; Shazia Subhani; Edward Cupler; Maha Faden; Amal Alhashem; Alya Qari; Aziza Chedrawi; Hisham Aldhalaan; Wesam Kurdi; Sameena Khan; Zuhair Rahbeeni; Maha Alotaibi; Ewa Goljan; Hadeel Elbardisy; Mohamed ElKalioby; Zeeshan Shah; Hibah Alruwaili; Amal Jaafar; Ranad Albar; Asma Akilan; Hamsa Tayeb; Asma Tahir; Mohammed Fawzy; Mohammed Nasr; Shaza Makki; Abdullah Alfaifi; Hanna Akleh; Suad Yamani; Dalal Bubshait; Mohammed Mahnashi; Talal Basha; Afaf Alsagheir; Musad Abu Khaled; Khalid Alsaleem; Maisoon Almugbel; Manal Badawi; Fahad Bashiri; Saeed Bohlega; Raashida Sulaiman; Ehab Tous; Syed Ahmed; Talal Algoufi; Hamoud Al-Mousa; Emadia Alaki; Susan Alhumaidi; Hadeel Alghamdi; Malak Alghamdi; Ahmed Sahly; Shapar Nahrir; Ali Al-Ahmari; Hisham Alkuraya; Ali Almehaidib; Mohammed Abanemai; Fahad Alsohaibaini; Bandar Alsaud; Rand Arnaout; Ghada M H Abdel-Salam; Hasan Aldhekri; Suzan AlKhater; Khalid Alqadi; Essam Alsabban; Turki Alshareef; Khalid Awartani; Hanaa Banjar; Nada Alsahan; Ibraheem Abosoudah; Abdullah Alashwal; Wajeeh Aldekhail; Sami Alhajjar; Sulaiman Al-Mayouf; Abdulaziz Alsemari; Walaa Alshuaibi; Saeed Altala; Abdulhadi Altalhi; Salah Baz; Muddathir Hamad; Tariq Abalkhail; Badi Alenazi; Alya Alkaff; Fahad Almohareb; Fuad Al Mutairi; Mona Alsaleh; Abdullah Alsonbul; Somaya Alzelaye; Shakir Bahzad; Abdulaziz Bin Manee; Ola Jarrad; Neama Meriki; Bassem Albeirouti; Amal Alqasmi; Mohammed AlBalwi; Nawal Makhseed; Saeed Hassan; Isam Salih; Mustafa A Salih; Marwan Shaheen; Saadeh Sermin; Shamsad Shahrukh; Shahrukh Hashmi; Ayman Shawli; Ameen Tajuddin; Abdullah Tamim; Ahmed Alnahari; Ibrahim Ghemlas; Maged Hussein; Sami Wali; Hatem Murad; Brian F Meyer; Fowzan S Alkuraya
Journal:  Am J Hum Genet       Date:  2019-05-23       Impact factor: 11.025

3.  ASHG 2020 Curt Stern Award introduction: Fowzan Sami Alkuraya.

Authors:  Cynthia C Morton
Journal:  Am J Hum Genet       Date:  2021-03-04       Impact factor: 11.025

Review 4.  Discovery of mutations for Mendelian disorders.

Authors:  Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2016-04-11       Impact factor: 4.132

5.  Genetics of intellectual disability in consanguineous families.

Authors:  Hao Hu; Kimia Kahrizi; Hans-Hilger Ropers; Hossein Najmabadi; Luciana Musante; Zohreh Fattahi; Ralf Herwig; Masoumeh Hosseini; Cornelia Oppitz; Seyedeh Sedigheh Abedini; Vanessa Suckow; Farzaneh Larti; Maryam Beheshtian; Bettina Lipkowitz; Tara Akhtarkhavari; Sepideh Mehvari; Sabine Otto; Marzieh Mohseni; Sanaz Arzhangi; Payman Jamali; Faezeh Mojahedi; Maryam Taghdiri; Elaheh Papari; Mohammad Javad Soltani Banavandi; Saeide Akbari; Seyed Hassan Tonekaboni; Hossein Dehghani; Mohammad Reza Ebrahimpour; Ingrid Bader; Behzad Davarnia; Monika Cohen; Hossein Khodaei; Beate Albrecht; Sarah Azimi; Birgit Zirn; Milad Bastami; Dagmar Wieczorek; Gholamreza Bahrami; Krystyna Keleman; Leila Nouri Vahid; Andreas Tzschach; Jutta Gärtner; Gabriele Gillessen-Kaesbach; Jamileh Rezazadeh Varaghchi; Bernd Timmermann; Fatemeh Pourfatemi; Aria Jankhah; Wei Chen; Pooneh Nikuei; Vera M Kalscheuer; Morteza Oladnabi; Thomas F Wienker
Journal:  Mol Psychiatry       Date:  2018-01-04       Impact factor: 15.992

6.  Somatic Mutations in NEK9 Cause Nevus Comedonicus.

Authors:  Jonathan L Levinsohn; Jeffrey L Sugarman; Jennifer M McNiff; Richard J Antaya; Keith A Choate
Journal:  Am J Hum Genet       Date:  2016-05-05       Impact factor: 11.025

7.  Prenatal exome sequencing and chromosomal microarray analysis in fetal structural anomalies in a highly consanguineous population reveals a propensity of ciliopathy genes causing multisystem phenotypes.

Authors:  Mohamed H Al-Hamed; Wesam Kurdi; Rubina Khan; Maha Tulbah; Maha AlNemer; Nada AlSahan; Maisoon AlMugbel; Rafiullah Rafiullah; Mirna Assoum; Dorota Monies; Zeeshan Shah; Zuhair Rahbeeni; Nada Derar; Fahad Hakami; Gawaher Almutairi; Afaf AlOtaibi; Wafaa Ali; Amal AlShammasi; Wardah AlMubarak; Samia AlDawoud; Saja AlAmri; Bashayer Saeed; Hanifa Bukhari; Mohannad Ali; Rana Akili; Laila Alquayt; Samia Hagos; Hadeel Elbardisy; Asma Akilan; Nora Almuhana; Abrar AlKhalifah; Mohamed Abouelhoda; Khushnooda Ramzan; John A Sayer; Faiqa Imtiaz
Journal:  Hum Genet       Date:  2021-12-01       Impact factor: 4.132

8.  GOLGA2, encoding a master regulator of golgi apparatus, is mutated in a patient with a neuromuscular disorder.

Authors:  Hanan E Shamseldin; Alexis H Bennett; Majid Alfadhel; Vandana Gupta; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2016-01-07       Impact factor: 4.132

9.  Heterozygous loss of WBP11 function causes multiple congenital defects in humans and mice.

Authors:  Ella M M A Martin; Annabelle Enriquez; Duncan B Sparrow; David T Humphreys; Aideen M McInerney-Leo; Paul J Leo; Emma L Duncan; Kavitha R Iyer; Joelene A Greasby; Eddie Ip; Eleni Giannoulatou; Delicia Sheng; Elizabeth Wohler; Clémantine Dimartino; Jeanne Amiel; Yline Capri; Daphné Lehalle; Adi Mory; Yael Wilnai; Yael Lebenthal; Ali G Gharavi; Grażyna G Krzemień; Monika Miklaszewska; Robert D Steiner; Cathy Raggio; Robert Blank; Hagit Baris Feldman; Hila Milo Rasouly; Nara L M Sobreira; Rebekah Jobling; Christopher T Gordon; Philip F Giampietro; Sally L Dunwoodie; Gavin Chapman
Journal:  Hum Mol Genet       Date:  2020-12-04       Impact factor: 6.150

10.  GNB5 mutation causes a novel neuropsychiatric disorder featuring attention deficit hyperactivity disorder, severely impaired language development and normal cognition.

Authors:  Hanan E Shamseldin; Ikuo Masuho; Ahmed Alenizi; Suad Alyamani; Dipak N Patil; Niema Ibrahim; Kirill A Martemyanov; Fowzan S Alkuraya
Journal:  Genome Biol       Date:  2016-09-27       Impact factor: 13.583

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