Literature DB >> 26631706

Development of a Q2MM Force Field for the Asymmetric Rhodium Catalyzed Hydrogenation of Enamides.

Patrick J Donoghue1, Paul Helquist1, Per-Ola Norrby1, Olaf Wiest1.   

Abstract

The rhodium catalyzed asymmetric hydrogenation of enamides to generate amino acid products and derivatives is a widely used method to generate unnatural amino acids. The choice of a chiral ligand is of utmost importance in this reaction and is often based on high throughput screening or simply trial and error. A virtual screening method can greatly increase the speed of the ligand screening process by calculating expected enantiomeric excesses from relative energies of diastereomeric transition states. Utilizing the Q2MM method, new molecular mechanics parameters are derived to model the hydride transfer transition state in the reaction. The new parameters were based off of structures calculated at the B3LYP/LACVP** level of theory and added to the MM3* force field. The new parameters were validated against a test set of experimental data utilizing a wide range of bis-phosphine ligands. The computational model agreed with experimental data well overall, with an unsigned mean error of 0.6 kcal/mol against a set of 18 data points from experiment. The major errors in the computational model were due either to large energetic errors at high e.e., still resulting in qualitative agreement, or cases where large steric interactions prevent the reaction from proceeding as expected.

Entities:  

Year:  2008        PMID: 26631706     DOI: 10.1021/ct800132a

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  10 in total

1.  Hydrogenation catalyst generates cyclic peptide stereocentres in sequence.

Authors:  Diane N Le; Eric Hansen; Hasan A Khan; Byoungmoo Kim; Olaf Wiest; Vy M Dong
Journal:  Nat Chem       Date:  2018-07-30       Impact factor: 24.427

2.  Application of Q2MM to predictions in stereoselective synthesis.

Authors:  Anthony R Rosales; Taylor R Quinn; Jessica Wahlers; Anna Tomberg; Xin Zhang; Paul Helquist; Olaf Wiest; Per-Ola Norrby
Journal:  Chem Commun (Camb)       Date:  2018-07-24       Impact factor: 6.222

3.  Transition State Force Field for the Asymmetric Redox-Relay Heck Reaction.

Authors:  Anthony R Rosales; Sean P Ross; Paul Helquist; Per-Ola Norrby; Matthew S Sigman; Olaf Wiest
Journal:  J Am Chem Soc       Date:  2020-05-14       Impact factor: 15.419

4.  Anomeric Effects in Sulfamides.

Authors:  Eric Hansen; Elaine Limé; Per-Ola Norrby; Olaf Wiest
Journal:  J Phys Chem A       Date:  2016-05-10       Impact factor: 2.781

5.  Stereoselectivity Predictions for the Pd-Catalyzed 1,4-Conjugate Addition Using Quantum-Guided Molecular Mechanics.

Authors:  Jessica Wahlers; Michael Maloney; Farbod Salahi; Anthony R Rosales; Paul Helquist; Per-Ola Norrby; Olaf Wiest
Journal:  J Org Chem       Date:  2021-03-26       Impact factor: 4.354

6.  Reducing Challenges in Organic Synthesis with Stereoselective Hydrogenation and Tandem Catalysis.

Authors:  Patrick D Parker; Xintong Hou; Vy M Dong
Journal:  J Am Chem Soc       Date:  2021-04-23       Impact factor: 16.383

7.  How Chain Length and Branching Influence the Alkene Cracking Reactivity on H-ZSM-5.

Authors:  Pieter Cnudde; Kristof De Wispelaere; Louis Vanduyfhuys; Ruben Demuynck; Jeroen Van der Mynsbrugge; Michel Waroquier; Veronique Van Speybroeck
Journal:  ACS Catal       Date:  2018-09-05       Impact factor: 13.084

8.  Proofreading experimentally assigned stereochemistry through Q2MM predictions in Pd-catalyzed allylic aminations.

Authors:  Jessica Wahlers; Jèssica Margalef; Eric Hansen; Armita Bayesteh; Paul Helquist; Montserrat Diéguez; Oscar Pàmies; Olaf Wiest; Per-Ola Norrby
Journal:  Nat Commun       Date:  2021-11-18       Impact factor: 14.919

9.  Prediction of Stereochemistry using Q2MM.

Authors:  Eric Hansen; Anthony R Rosales; Brandon Tutkowski; Per-Ola Norrby; Olaf Wiest
Journal:  Acc Chem Res       Date:  2016-04-11       Impact factor: 22.384

10.  Automated fitting of transition state force fields for biomolecular simulations.

Authors:  Taylor R Quinn; Himani N Patel; Kevin H Koh; Brandon E Haines; Per-Ola Norrby; Paul Helquist; Olaf Wiest
Journal:  PLoS One       Date:  2022-03-10       Impact factor: 3.240

  10 in total

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