Literature DB >> 26629320

Disruption of NAD(+) binding site in glyceraldehyde 3-phosphate dehydrogenase affects its intranuclear interactions.

Manali Phadke1, Natalia Krynetskaia1, Anurag Mishra1, Carlos Barrero1, Salim Merali1, Scott A Gothe1, Evgeny Krynetskiy1.   

Abstract

AIM: To characterize phosphorylation of human glyceraldehyde 3-phosphate dehydrogenase (GAPDH), and mobility of GAPDH in cancer cells treated with chemotherapeutic agents.
METHODS: We used proteomics analysis to detect and characterize phosphorylation sites within human GAPDH. Site-specific mutagenesis and alanine scanning was then performed to evaluate functional significance of phosphorylation sites in the GAPDH polypeptide chain. Enzymatic properties of mutated GAPDH variants were assessed using kinetic studies. Intranuclear dynamics parameters (diffusion coefficient and the immobile fraction) were estimated using fluorescence recovery after photobleaching (FRAP) experiments and confocal microscopy. Molecular modeling experiments were performed to estimate the effects of mutations on NAD(+) cofactor binding.
RESULTS: Using MALDI-TOF analysis, we identified novel phosphorylation sites within the NAD(+) binding center of GAPDH at Y94, S98, and T99. Using polyclonal antibody specific to phospho-T99-containing peptide within GAPDH, we demonstrated accumulation of phospho-T99-GAPDH in the nuclear fractions of A549, HCT116, and SW48 cancer cells after cytotoxic stress. We performed site-mutagenesis, and estimated enzymatic properties, intranuclear distribution, and intranuclear mobility of GAPDH mutated variants. Site-mutagenesis at positions S98 and T99 in the NAD(+) binding center reduced enzymatic activity of GAPDH due to decreased affinity to NAD(+) (Km = 741 ± 257 μmol/L in T99I vs 57 ± 11.1 µmol/L in wild type GAPDH. Molecular modeling experiments revealed the effect of mutations on NAD(+) binding with GAPDH. FRAP (fluorescence recovery after photo bleaching) analysis showed that mutations in NAD(+) binding center of GAPDH abrogated its intranuclear interactions.
CONCLUSION: Our results suggest an important functional role of phosphorylated amino acids in the NAD(+) binding center in GAPDH interactions with its intranuclear partners.

Entities:  

Keywords:  Anticancer agents; Binding site; Fluorescence recovery after photobleaching; Glyceraldehyde 3-phosphate dehydrogenase; Mutation; NAD+; Nuclear proteins

Year:  2015        PMID: 26629320      PMCID: PMC4657119          DOI: 10.4331/wjbc.v6.i4.366

Source DB:  PubMed          Journal:  World J Biol Chem        ISSN: 1949-8454


  27 in total

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Authors:  Michael A Sirover
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7.  Glyceraldehyde-3-phosphate dehydrogenase selectively binds AU-rich RNA in the NAD(+)-binding region (Rossmann fold).

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8.  A novel CRM1-mediated nuclear export signal governs nuclear accumulation of glyceraldehyde-3-phosphate dehydrogenase following genotoxic stress.

Authors:  Victor M Brown; Eugene Y Krynetski; Natalia F Krynetskaia; Dara Grieger; Suraj T Mukatira; Kuruganti G Murti; Clive A Slaughter; Hee-Won Park; William E Evans
Journal:  J Biol Chem       Date:  2003-11-14       Impact factor: 5.157

9.  Nitric oxide-induced nuclear GAPDH activates p300/CBP and mediates apoptosis.

Authors:  Nilkantha Sen; Makoto R Hara; Michael D Kornberg; Matthew B Cascio; Byoung-Il Bae; Neelam Shahani; Bobby Thomas; Ted M Dawson; Valina L Dawson; Solomon H Snyder; Akira Sawa
Journal:  Nat Cell Biol       Date:  2008-06-15       Impact factor: 28.824

Review 10.  Target for diverse chemical modifications.

Authors:  Norbert W Seidler
Journal:  Adv Exp Med Biol       Date:  2013       Impact factor: 2.622

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1.  Proteome-Wide Characterization of Phosphorylation-Induced Conformational Changes in Breast Cancer.

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  1 in total

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