| Literature DB >> 26628751 |
Brian J Reid1, Joseph G Culotti2, Robert S Nash3, John R Pringle4.
Abstract
In the early 1970s, studies in Leland Hartwell's laboratory at the University of Washington launched the genetic analysis of the eukaryotic cell cycle and set the path that has led to our modern understanding of this centrally important process. This 45th-anniversary Retrospective reviews the steps by which the project took shape, the atmosphere in which this happened, and the possible morals for modern times. It also provides an up-to-date look at the 35 original CDC genes and their human homologues.Entities:
Mesh:
Year: 2015 PMID: 26628751 PMCID: PMC4666127 DOI: 10.1091/mbc.E14-10-1484
Source DB: PubMed Journal: Mol Biol Cell ISSN: 1059-1524 Impact factor: 4.138
The 35 original CDC genes today, and their human homologues.
| CDC genea | Functional description of the yeast gene productb | Human gene name(s) and BLASTP E-value(s)c | Functional description of the human gene productd |
|---|---|---|---|
| Putative metallophosphodiesterase | Metallophosphodiesterase | ||
| DNA polymerase delta catalytic subunit | DNA polymerase delta catalytic subunit | ||
| Septin family member; involved in cytokinesis | Septin family members | ||
| SCF E3 ubiquitin ligase F-box protein (substrate-specificity factor) | SCF(Fbw7) ubiquitin-ligase substrate receptor | ||
| Polo-like kinase | Polo kinase | ||
| ATPase subunit of the prereplicative complex | Replication origin licensing factor | ||
| Catalytic subunit of the Dbf4-dependent kinase (DDK) | Catalytic subunit of the Dbf4-dependent kinase | ||
| Thymidylate/uridylate kinase | Thymidylate kinase | ||
| ATP-dependent DNA ligase | ATP-dependent DNA ligase | ||
| Septin family member; involved in cytokinesis | Septin family members | ||
| Septin family member; involved in cytokinesis | Septin family members | ||
| Septin family member; involved in cytokinesis | Septin family members | ||
| Telomeric ssDNA-binding protein and telomere-cap–complex subunit | Telomeric ssDNA-binding protein; subunit of the telomere cap and shelterin complexes | ||
| Protein phosphatase subunit of the RENT complex | Dual-specificity protein phosphatases | ||
| Ser/Thr protein kinase of the mitotic exit network | None; N/A | The CDC15 subfamily has not been identified in humans | |
| Anaphase-promoting complex/cyclosome (APC/C) subunit | Anaphase-promoting complex/cyclosome (APC/C) subunit | ||
| Catalytic subunit of the DNA pol I alpha–primase complex | Catalytic subunit of DNA pol I alpha–primase complex | ||
| CDC18 | Unknown, not well studied; original alleles are leaky | N/A | N/A |
| Pyruvate kinase | One of four pyruvate kinases | ||
| Mitotic activator of the anaphase-promoting complex/cyclosome (APC/C) | Mitotic activator of the anaphase-promoting complex/cyclosome (APC/C) | ||
| Thymidylate synthase | Thymidylate synthase | ||
| CDC22 | Unknown, original isolates were multigenic | N/A | N/A |
| Anaphase-promoting complex/cyclosome (APC/C) subunit | Anaphase-promoting complex/cyclosome (APC/C) subunit | ||
| Rho guanyl-nucleotide exchange factor for Cdc42p | One of many CDC24 homologues | ||
| Ras guanyl-nucleotide exchange factor (GEF) | Ras guanyl-nucleotide exchange factors (GEF) | ||
| Anaphase-promoting complex/cyclosome (APC/C) subunit | Anaphase-promoting complex/cyclosome (APC/C) subunit | ||
| Anaphase-promoting complex/cyclosome (APC/C) subunit | Anaphase-promoting complex/cyclosome (APC/C) subunit | ||
| Cyclin-dependent kinase (CDK) catalytic subunit | Cyclin-dependent kinase (CDK) catalytic subunit | ||
| CDC29 | Unknown, not well studied; exists only as a genetic locus | N/A | N/A |
| Glucose-6-phosphate isomerase | Glucose-6-phosphate isomerase | ||
| Centrin | Centrin | ||
| CDC32 | Unknown, genetically intractable | N/A | N/A |
| mRNA m7G cap-binding protein (eIF4E) | mRNA m7G cap-binding protein (eIF4E) | ||
| SCF ubiquitin-conjugating enzyme (E2) | SCF-associated ubiquitin-conjugating enzyme (E2) | ||
| Adenylate cyclase | Multiple structurally distinct human | Adenylyl cyclase family members |
aCDC name (with current standard name, where different, in parentheses); entries link to the Saccharomyces Genome Database (SGD) (PMID: 22110037).
bSummarized from information provided in the SGD entries.
cAs approved by the HUGO Gene Nomenclature Committee. E-values were obtained by querying the NCBI human taxon (taxid:9606), restricted, nonredundant protein sequence data set with the predicted amino acid sequence of the yeast genes using BLASTP.
dSummarized from the literature; see the Supplemental Material for details and references.
eCdc13 and Pot1 do not have detectable sequence similarity but are considered to be structurally similar (see the Supplemental Material for relevant references).