Literature DB >> 26628149

Quantification of protein interaction kinetics in a micro droplet.

L L Yin1, S P Wang1, X N Shan1, S T Zhang2, N J Tao1.   

Abstract

Characterization of protein interactions is essential to the discovery of disease biomarkers, the development of diagnostic assays, and the screening for therapeutic drugs. Conventional flow-through kinetic measurements need relative large amount of sample that is not feasible for precious protein samples. We report a novel method to measure protein interaction kinetics in a single droplet with sub microliter or less volume. A droplet in a humidity-controlled environmental chamber is replacing the microfluidic channels as the reactor for the protein interaction. The binding process is monitored by a surface plasmon resonance imaging (SPRi) system. Association curves are obtained from the average SPR image intensity in the center area of the droplet. The washing step required by conventional flow-through SPR method is eliminated in the droplet method. The association and dissociation rate constants and binding affinity of an antigen-antibody interaction are obtained by global fitting of association curves at different concentrations. The result obtained by this method is accurate as validated by conventional flow-through SPR system. This droplet-based method not only allows kinetic studies for proteins with limited supply but also opens the door for high-throughput protein interaction study in a droplet-based microarray format that enables measurement of many to many interactions on a single chip.

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Year:  2015        PMID: 26628149      PMCID: PMC4636506          DOI: 10.1063/1.4934802

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  24 in total

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Journal:  Anal Biochem       Date:  2000-03-01       Impact factor: 3.365

Review 2.  Far-Western based protein-protein interaction screening of high-density protein filter arrays.

Authors:  U Mahlknecht; O G Ottmann; D Hoelzer
Journal:  J Biotechnol       Date:  2001-06-15       Impact factor: 3.307

3.  Evaporation of water microdroplets on self-assembled monolayers: from pinning to shrinking.

Authors:  Hua-Zhong Yu; Dinah M Soolaman; Aaron W Rowe; Jeffrey T Banks
Journal:  Chemphyschem       Date:  2004-07-19       Impact factor: 3.102

4.  Real-time surface plasmon resonance imaging measurements for the multiplexed determination of protein adsorption/desorption kinetics and surface enzymatic reactions on peptide microarrays.

Authors:  Greta J Wegner; Alastair W Wark; Hye Jin Lee; Eric Codner; Tomonori Saeki; Shiping Fang; Robert M Corn
Journal:  Anal Chem       Date:  2004-10-01       Impact factor: 6.986

5.  Self-assembled organic monolayers: model systems for studying adsorption of proteins at surfaces.

Authors:  K L Prime; G M Whitesides
Journal:  Science       Date:  1991-05-24       Impact factor: 47.728

6.  Charge-based detection of small molecules by plasmonic-based electrochemical impedance microscopy.

Authors:  Christopher MacGriff; Shaopeng Wang; Peter Wiktor; Wei Wang; Xiaonan Shan; Nongjian Tao
Journal:  Anal Chem       Date:  2013-07-03       Impact factor: 6.986

7.  NanoProbeArrays for the analysis of ultra-low-volume protein samples using piezoelectric liquid dispensing technology.

Authors:  Vinay Janthakahalli Nagaraj; Seron Eaton; Peter Wiktor
Journal:  J Lab Autom       Date:  2010-10-08

8.  Plasmonic-based electrochemical impedance spectroscopy: application to molecular binding.

Authors:  Jin Lu; Wei Wang; Shaopeng Wang; Xiaonan Shan; Jinghong Li; Nongjian Tao
Journal:  Anal Chem       Date:  2011-12-14       Impact factor: 6.986

9.  Piezoelectric printing and probing of Lectin NanoProbeArrays for glycosylation analysis.

Authors:  Vinay J Nagaraj; Seron Eaton; Derek Thirstrup; Peter Wiktor
Journal:  Biochem Biophys Res Commun       Date:  2008-08-19       Impact factor: 3.575

10.  Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform.

Authors:  Andrew L Chang; Maureen McKeague; Joe C Liang; Christina D Smolke
Journal:  Anal Chem       Date:  2014-03-14       Impact factor: 6.986

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  2 in total

Review 1.  Microfluidic Surface Plasmon Resonance Sensors: From Principles to Point-of-Care Applications.

Authors:  Da-Shin Wang; Shih-Kang Fan
Journal:  Sensors (Basel)       Date:  2016-07-27       Impact factor: 3.576

2.  Kinetics of PTEN-mediated PI(3,4,5)P3 hydrolysis on solid supported membranes.

Authors:  Chun Liu; Sanghamitra Deb; Vinicius S Ferreira; Eric Xu; Tobias Baumgart
Journal:  PLoS One       Date:  2018-02-15       Impact factor: 3.240

  2 in total

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