Literature DB >> 26625286

Heterogeneous nucleation is required for crystallization of the ZnuA domain of pneumococcal AdcA.

Zhenyao Luo1, Jacqueline R Morey2, Christopher A McDevitt2, Boštjan Kobe1.   

Abstract

Zn(2+) is an essential nutrient for all known forms of life. In the major human pathogen Streptococcus pneumoniae, the acquisition of Zn(2+) is facilitated by two Zn(2+)-specific solute-binding proteins: AdcA and AdcAII. To date, there has been a paucity of structural information on AdcA, which has hindered a deeper understanding of the mechanism underlying pneumococcal Zn(2+) acquisition. Native AdcA consists of two domains: an N-terminal ZnuA domain and a C-terminal ZinT domain. In this study, the ZnuA domain of AdcA was crystallized. The initial crystals of the ZnuA-domain protein were obtained using dried seaweed as a heterogeneous nucleating agent. No crystals were obtained in the absence of the heterogeneous nucleating agent. These initial crystals were subsequently used as seeds to produce diffraction-quality crystals. The crystals diffracted to 2.03 Å resolution and had the symmetry of space group P1. This study demonstrates the utility of heterogeneous nucleation. The solution of the crystal structures will lead to further understanding of Zn(2+) acquisition by S. pneumoniae.

Entities:  

Keywords:  AdcA; Streptococcus pneumoniae; Zn2+; ZnuA; heterogeneous nucleation; seaweed; solute-binding protein

Mesh:

Substances:

Year:  2015        PMID: 26625286      PMCID: PMC4666472          DOI: 10.1107/S2053230X15021330

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  33 in total

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Authors:  N E Chayen; E Saridakis; R El-Bahar; Y Nemirovsky
Journal:  J Mol Biol       Date:  2001-09-28       Impact factor: 5.469

Review 2.  Bacterial ATP-driven transporters of transition metals: physiological roles, mechanisms of action, and roles in bacterial virulence.

Authors:  Joshua S Klein; Oded Lewinson
Journal:  Metallomics       Date:  2011-09-07       Impact factor: 4.526

3.  Zinc uptake by Streptococcus pneumoniae depends on both AdcA and AdcAII and is essential for normal bacterial morphology and virulence.

Authors:  Lucie Bayle; Suneeta Chimalapati; Guy Schoehn; Jeremy Brown; Thierry Vernet; Claire Durmort
Journal:  Mol Microbiol       Date:  2011-10-24       Impact factor: 3.501

4.  AdcA and AdcAII employ distinct zinc acquisition mechanisms and contribute additively to zinc homeostasis in Streptococcus pneumoniae.

Authors:  Charles D Plumptre; Bart A Eijkelkamp; Jacqueline R Morey; Felix Behr; Rafael M Couñago; Abiodun D Ogunniyi; Bostjan Kobe; Megan L O'Mara; James C Paton; Christopher A McDevitt
Journal:  Mol Microbiol       Date:  2014-01-16       Impact factor: 3.501

Review 5.  Structure, function, and evolution of bacterial ATP-binding cassette systems.

Authors:  Amy L Davidson; Elie Dassa; Cedric Orelle; Jue Chen
Journal:  Microbiol Mol Biol Rev       Date:  2008-06       Impact factor: 11.056

6.  Heterogeneous nucleation helps the search for initial crystallization conditions of γ-glutamyl transpeptidase from Bacillus licheniformis.

Authors:  Long Liu Lin; Antonello Merlino
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-25

7.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

8.  Heterogeneous nucleation of protein crystals on fluorinated layered silicate.

Authors:  Keita Ino; Itsumi Udagawa; Kazuki Iwabata; Yoichi Takakusagi; Munehiro Kubota; Keiichi Kurosaka; Kazuhito Arai; Yasutaka Seki; Masaya Nogawa; Tatsuo Tsunoda; Fujio Mizukami; Hayao Taguchi; Kengo Sakaguchi
Journal:  PLoS One       Date:  2011-07-27       Impact factor: 3.240

9.  A molecular mechanism for bacterial susceptibility to zinc.

Authors:  Christopher A McDevitt; Abiodun D Ogunniyi; Eugene Valkov; Michael C Lawrence; Bostjan Kobe; Alastair G McEwan; James C Paton
Journal:  PLoS Pathog       Date:  2011-11-03       Impact factor: 6.823

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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