Literature DB >> 26621709

Protein-like proton exchange in a synthetic host cavity.

William M Hart-Cooper1, Carmelo Sgarlata1, Charles L Perrin2, F Dean Toste3, Robert G Bergman3, Kenneth N Raymond3.   

Abstract

The mechanism of proton exchange in a metal-ligand enzyme active site mimic (compound 1) is described through amide hydrogen-deuterium exchange kinetics. The type and ratio of cationic guest to host in solution affect the rate of isotope exchange, suggesting that the rate of exchange is driven by a host whose cavity is occupied by water. Rate constants for acid-, base-, and water-mediated proton exchange vary by orders of magnitude depending on the guest, and differ by up to 200 million-fold relative to an alanine polypeptide. These results suggest that the unusual microenvironment of the cavity of 1 can dramatically alter the reactivity of associated water by magnitudes comparable to that of enzymes.

Entities:  

Keywords:  catalysis; hydrogen–deuterium exchange; noncovalent; proton; supramolecular

Mesh:

Substances:

Year:  2015        PMID: 26621709      PMCID: PMC4687555          DOI: 10.1073/pnas.1515639112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Cage-catalyzed Knoevenagel condensation under neutral conditions in water.

Authors:  Takashi Murase; Yuki Nishijima; Makoto Fujita
Journal:  J Am Chem Soc       Date:  2011-12-12       Impact factor: 15.419

2.  Encapsulation of discrete (H(2)O)(12) clusters in a 3D three-fold interpenetrating metal-organic framework host with (3,4)-connected topology.

Authors:  Xiuli Wang; Hongyan Lin; Bao Mu; Aixiang Tian; Guocheng Liu
Journal:  Dalton Trans       Date:  2010-06-14       Impact factor: 4.390

3.  Guest exchange dynamics in an M4L6 tetrahedral host.

Authors:  Anna V Davis; Dorothea Fiedler; Georg Seeber; Achim Zahl; Rudi van Eldik; Kenneth N Raymond
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

Review 4.  Protons and how they are transported by proton pumps.

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Journal:  Pflugers Arch       Date:  2008-05-06       Impact factor: 3.657

5.  Programmed enzyme-mimic hydrolysis of a choline carbonate by a metal-free 2-aminobenzimidazole-based cavitand.

Authors:  Bartolomé Soberats; Elena Sanna; Gabriel Martorell; Carmen Rotger; Antoni Costa
Journal:  Org Lett       Date:  2014-01-13       Impact factor: 6.005

6.  Supramolecular catalysis of unimolecular rearrangements: substrate scope and mechanistic insights.

Authors:  Dorothea Fiedler; Herman van Halbeek; Robert G Bergman; Kenneth N Raymond
Journal:  J Am Chem Soc       Date:  2006-08-09       Impact factor: 15.419

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Authors:  S W Englander; L Mayne; Y Bai; T R Sosnick
Journal:  Protein Sci       Date:  1997-05       Impact factor: 6.725

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Authors:  J F Nagle; S Tristram-Nagle
Journal:  J Membr Biol       Date:  1983       Impact factor: 1.843

Review 9.  H+ transport and coupling by the F0 sector of the ATP synthase: insights into the molecular mechanism of function.

Authors:  R H Fillingame
Journal:  J Bioenerg Biomembr       Date:  1992-10       Impact factor: 2.945

10.  A billion-fold range in acidity for the solvent-exposed amides of Pyrococcus furiosus rubredoxin.

Authors:  Janet S Anderson; Griselda Hernández; David M Lemaster
Journal:  Biochemistry       Date:  2008-05-15       Impact factor: 3.162

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  3 in total

1.  Excitation Energy Delocalization and Transfer to Guests within MII4L6 Cage Frameworks.

Authors:  Andrew J Musser; Prakash P Neelakandan; Johannes M Richter; Hirotaka Mori; Richard H Friend; Jonathan R Nitschke
Journal:  J Am Chem Soc       Date:  2017-08-15       Impact factor: 15.419

2.  Toward Coordination Cages with Hybrid Chirality: Amino Acid-Induced Chirality on Metal Centers.

Authors:  Marcin Grajda; Grzegorz Staros; Hanna Jędrzejewska; Agnieszka Szumna
Journal:  Inorg Chem       Date:  2022-07-10       Impact factor: 5.436

3.  Interplay of water and a supramolecular capsule for catalysis of reductive elimination reaction from gold.

Authors:  Valerie Vaissier Welborn; Wan-Lu Li; Teresa Head-Gordon
Journal:  Nat Commun       Date:  2020-01-21       Impact factor: 14.919

  3 in total

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